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Report for CCDS13300.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
13300.1 |
Public |
Homo sapiens |
20 |
TTI1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:9675](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:13300.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:9675](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 20 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 13300.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000373447.8 |
ENSP00000362546.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000373447.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000362546.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000373447](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000362546](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000373448.6 |
ENSP00000362547.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000373448.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000362547.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000373448](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000362547](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000449821.1 |
ENSP00000407270.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000449821.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000407270.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000449821](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000407270](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001303457.2 |
NP_001290386.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001303457.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001290386.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001303457](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001290386](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001290386.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_014657.3 |
NP_055472.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_014657.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_055472.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_014657](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_055472](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_055472.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 13300.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3270 nt): ATGGCAGTTTTTGATACTCCTGAGGAGGCCTTTGGTGTCTTACGTCCAGTCTGTGTTCAGCTCACAAAGA CCCAGACAGTGGAGAATGTGGAGCATCTGCAGACACGACTACAAGCTGTGAGTGACAGTGCCCTTCAGGA ACTTCAGCAGTACATCCTCTTCCCTCTGCGATTTACCCTGAAGACCCCAGGTCCCAAAAGAGAGCGTTTG ATCCAAAGTGTGGTGGAATGCCTCACATTTGTCCTTTCTTCAACATGTGTGAAAGAACAGGAGCTTCTCC AGGAACTCTTTTCAGAACTCTCTGCTTGTCTGTATTCACCCAGCTCCCAAAAACCTGCGGCTGTGTCCGA GGAGTTGAAATTGGCTGTGATCCAGGGACTTAGCACATTAATGCACTCAGCTTATGGGGACATCATTCTG ACTTTTTATGAGCCCTCCATTCTGCCACGTTTAGGATTTGCTGTATCTTTACTGTTAGGCCTTGCAGAAC AGGAGAAATCAAAGCAAATTAAAATTGCTGCCTTAAAATGTTTACAGGTTCTACTCTTGCAGTGTGATTG TCAGGACCATCCAAGGTCATTGGATGAACTTGAACAAAAGCAGCTGGGGGATTTGTTTGCCTCTTTTTTA CCTGGAATCTCAACTGCACTGACCAGGCTTATCACAGGAGACTTTAAACAAGGTCACAGCATTGTCGTAT CTTCCCTAAAGATCTTTTACAAGACAGTGAGCTTCATTATGGCTGATGAACAGCTCAAAAGAATCTCAAA GGTCCAAGCAAAACCTGCAGTTGAGCACAGAGTAGCAGAGCTGATGGTTTACAGGGAAGCAGATTGGGTA AAAAAGACTGGCGACAAGTTGACTATCCTTATTAAAAAGATAATTGAGTGTGTTTCTGTTCACCCACACT GGAAGGTGAGACTGGAACTGGTAGAACTTGTGGAGGACCTTCTTTTGAAGTGCAGTCAATCATTGGTCGA ATGTGCTGGTCCCCTTCTGAAGGCCTTAGTGGGACTAGTAAATGATGAGAGTCCTGAAATCCAAGCCCAG TGCAATAAAGTTCTGAGACATTTTGCAGATCAAAAAGTAGTGGTGGGCAACAAAGCCCTCGCTGACATCT TGTCAGAAAGCCTGCATTCCCTTGCCACATCTCTTCCTCGCCTAATGAACTCCCAAGATGACCAGGGCAA ATTCTCTACTCTTTCCTTGTTACTTGGTTATCTGAAACTCTTGGGCCCAAAAATAAACTTTGTCCTCAAC TCTGTGGCCCATCTCCAGCGGCTTTCCAAAGCACTCATCCAAGTTCTAGAGCTAGACGTGGCTGACATCA AGATTGTTGAGGAACGGCGTTGGAACTCTGATGATCTGAATGCTTCTCCAAAGACCTCAGCCACACAGCC TTGGAACCGCATCCAGAGGAGATATTTCCGCTTCTTCACTGATGAGAGAATCTTCATGCTCTTGAGGCAG GTTTGTCAGCTACTTGGTTATTATGGGAATCTTTATTTGCTTGTGGATCACTTTATGGAACTTTACCATC AATCTGTGGTTTACCGGAAGCAAGCTGCCATGATCCTTAATGAACTGGTTACAGGGGCTGCTGGGCTGGA GGTTGAGGATCTTCACGAAAAACATATTAAAACAAACCCAGAAGAACTGAGAGAGATTGTGACATCTATA CTTGAAGAATACACAAGTCAAGAAAATTGGTATTTGGTTACCTGTCTTGAAACTGAGGAAATGGGAGAGG AGCTGATGATGGAGCACCCAGGCCTCCAAGCCATCACGTCTGGTGAACACACCTGCCAAGTTACATCTTT TCTAGCCTTCTCAAAGCCAAGTCCCACTATTTGCTCCATGAACAGTAACATCTGGCAAATATGCATTCAG TTGGAAGGAATTGGCCAGTTTGCATATGCACTAGGAAAAGACTTCTGTTTGCTCTTGATGTCAGCCCTTT ATCCAGTACTGGAGAAGGCTGGAGACCAAACCCTACTCATTAGTCAGGTGGCTACCAGCACCATGATGGA CGTTTGCCGTGCTTGTGGCTACGACTCCCTGCAGCACCTGATCAATCAAAATTCAGACTATTTAGTGAAT GGGATCTCTTTAAATCTGCGTCATCTGGCTCTGCATCCTCATACCCCAAAGGTCCTGGAAGTCATGCTGC GGAACTCAGATGCTAACCTGCTTCCTTTGGTGGCAGATGTGGTTCAAGATGTCTTGGCCACCCTGGACCA ATTTTACGATAAGAGAGCTGCTTCCTTTGTCAGCGTTCTGCATGCTCTGATGGCAGCATTAGCCCAGTGG TTCCCAGACACAGGTAATCTTGGGCACCTCCAAGAGCAAAGTTTAGGAGAAGAGGGAAGTCATTTGAACC AAAGACCAGCAGCTCTTGAGAAGAGCACCACCACAGCTGAAGACATCGAACAGTTTTTGCTGAACTACCT CAAAGAGAAGGATGTGGCAGATGGAAATGTCTCGGATTTTGATAATGAAGAAGAGGAACAGTCAGTCCCT CCCAAAGTGGATGAGAATGACACCCGTCCAGATGTGGAGCCACCACTGCCATTGCAGATCCAAATAGCCA TGGACGTGATGGAACGCTGCATCCACTTGTTGTCAGATAAAAATCTGCAAATCCGCCTGAAGGTCTTGGA TGTGCTGGATCTGTGTGTGGTTGTTCTTCAGTCCCACAAAAACCAGCTGCTTCCCTTGGCTCATCAGGCC TGGCCCTCGCTCGTTCACCGACTCACACGGGACGCCCCCCTGGCAGTGCTTAGAGCCTTCAAGGTTTTAC GTACCCTGGGAAGCAAGTGTGGTGACTTTCTTCGCAGCCGGTTCTGCAAAGATGTCCTGCCAAAGCTGGC TGGCTCCCTAGTCACCCAGGCCCCCATCAGTGCCAGGGCTGGACCAGTTTACTCGCACACGCTGGCCTTC AAGTTGCAGCTGGCTGTCTTACAGGGCCTGGGCCCCCTCTGTGAGAGACTGGACCTAGGTGAGGGTGACC TGAATAAAGTGGCTGATGCCTGCTTGATTTACCTCAGTGTCAAACAGCCCGTGAAATTACAAGAGGCTGC CAGGAGCGTCTTCCTCCACTTGATGAAGGTGGACCCAGACTCCACCTGGTTCCTCCTGAACGAGCTTTAC TGCCCCGTGCAGTTCACACCTCCCCACCCCAGCCTCCACCCTGTGCAGCTGCACGGGGCCAGCGGGCAGC AGAACCCCTACACGACCAACGTGCTCCAGCTGCTCAAGGAGCTGCAGTGA
Translation (1089 aa): MAVFDTPEEAFGVLRPVCVQLTKTQTVENVEHLQTRLQAVSDSALQELQQYILFPLRFTLKTPGPKRERL IQSVVECLTFVLSSTCVKEQELLQELFSELSACLYSPSSQKPAAVSEELKLAVIQGLSTLMHSAYGDIIL TFYEPSILPRLGFAVSLLLGLAEQEKSKQIKIAALKCLQVLLLQCDCQDHPRSLDELEQKQLGDLFASFL PGISTALTRLITGDFKQGHSIVVSSLKIFYKTVSFIMADEQLKRISKVQAKPAVEHRVAELMVYREADWV KKTGDKLTILIKKIIECVSVHPHWKVRLELVELVEDLLLKCSQSLVECAGPLLKALVGLVNDESPEIQAQ CNKVLRHFADQKVVVGNKALADILSESLHSLATSLPRLMNSQDDQGKFSTLSLLLGYLKLLGPKINFVLN SVAHLQRLSKALIQVLELDVADIKIVEERRWNSDDLNASPKTSATQPWNRIQRRYFRFFTDERIFMLLRQ VCQLLGYYGNLYLLVDHFMELYHQSVVYRKQAAMILNELVTGAAGLEVEDLHEKHIKTNPEELREIVTSI LEEYTSQENWYLVTCLETEEMGEELMMEHPGLQAITSGEHTCQVTSFLAFSKPSPTICSMNSNIWQICIQ LEGIGQFAYALGKDFCLLLMSALYPVLEKAGDQTLLISQVATSTMMDVCRACGYDSLQHLINQNSDYLVN GISLNLRHLALHPHTPKVLEVMLRNSDANLLPLVADVVQDVLATLDQFYDKRAASFVSVLHALMAALAQW FPDTGNLGHLQEQSLGEEGSHLNQRPAALEKSTTTAEDIEQFLLNYLKEKDVADGNVSDFDNEEEEQSVP PKVDENDTRPDVEPPLPLQIQIAMDVMERCIHLLSDKNLQIRLKVLDVLDLCVVVLQSHKNQLLPLAHQA WPSLVHRLTRDAPLAVLRAFKVLRTLGSKCGDFLRSRFCKDVLPKLAGSLVTQAPISARAGPVYSHTLAF KLQLAVLQGLGPLCERLDLGEGDLNKVADACLIYLSVKQPVKLQEAARSVFLHLMKVDPDSTWFLLNELY CPVQFTPPHPSLHPVQLHGASGQQNPYTTNVLQLLKELQ
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