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Report for CCDS22124.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22124.1 Public Mus musculus 8 Mcph1 23 108 98 CCDS HistoryNCBI Gene:244329Re-query CCDS DB by CCDS ID:22124.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22124.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000039412.14 ENSMUSP00000037000.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000039412.14Link to Ensembl Protein Viewer:ENSMUSP00000037000.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000039412Re-query CCDS DB by Protein ID:ENSMUSP00000037000
Original member NCBI NM_173189.3 NP_775281.2 Updated not alive Link to Nucleotide Sequence:NM_173189.3Link to Protein Sequence:NP_775281.2Re-query CCDS DB by Nucleotide ID:NM_173189Re-query CCDS DB by Protein ID:NP_775281
Current member NCBI NM_173189.4 NP_775281.2 Accepted alive Link to Nucleotide Sequence:NM_173189.4Link to Protein Sequence:NP_775281.2Re-query CCDS DB by Nucleotide ID:NM_173189Re-query CCDS DB by Protein ID:NP_775281Link to BLAST:NP_775281.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775281.2 822 Q7TT79 822 100% 0 0

Chromosomal Locations for CCDS 22124.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 18595596 18595635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 18596923 18597014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 18607279 18607397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 18622607 18622694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 18625560 18625674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 18627118 18627240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 18629546 18629635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 18631516 18632643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 18641565 18641665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 18668946 18668983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 18671092 18671254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 18688982 18689059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 18788239 18788476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 18801406 18801461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2469 nt):
ATGGAGGCCTCGGGAGGCGTTGGGGGCGCCTTTCTGAAAGATGTTGTGGCCTATGTTGAAGTATGGTCTT
CCAAAGGGACAGAGAATTACTCAAGGACGTTTGCAAAGCAACTTGAGGATATGGGGGCAACGGTTTCAAA
AACCTTGAACAAGCAAGTGACCCATGTGATCTTCAAAGATGGATATCAGAGCACCTGGGACAAAGCCCAG
AAGACCGGGGCGAAGCTGGTTTCCGTCCTCTGGGTTGAAAAATGCAGGATGGCTGGAGCACTTGTTGATG
AGTCTTTGTTCCCTGCAGTGAATACCGATGAACATCTACCAAACTTAAGTAGAAAAAAACACAAATGTAT
GCAACCCAAAGATTTTATTCTTAAAACACCAGAAAATGACAAAAGACTTCAAAAGAAATTTGAGAAAATG
GCTGAAGAGCTACAAAGGCAAAAGGCAGCTCTAGATGATGACGTTCCTGTCCTCCTGTTTGAGTCCCCTC
GCTCACTGGTGTACAGCTCCCCAGTGAATGTGATGAAGAGGAGACTGCAGGATATGAAGGAGAAGAGGGA
GAACCTTTCCCCTACCTCCTCCCAGATGTTGGAGCAGTCTCAGCAGAATCCATGTGTCAGTCTGTTTGAA
ACATCCTTGAACATTTCTCACCAACCTTTGAGTTCAGATGAATCCTTTGCCAGTGGCTCCCACTCATCTT
TCGGTGATTCCTGTGGAGATCAAGAAAGGAAACTGGGAAGATCTGCTAATGAGATGACCACGGTGACATG
CCCTTCCTCACCTGTGTTGAGGGCAAGCAGTTTTTATGGCTCAGCATCACCCAACCATCTCAGGCAGCCA
CGTCCTCAGAAAGCTCCAGACAGTCCTTCAAAGGAGAGCATCAACTGTCAGAAGGATGCTACAGGTGCGG
TAGCTGATTCCGAGAGAAAGCAAGCTGCAGGTGTATCTCAGGGGGTGCCTGATGAGAAGCTCTGTCTGTC
TCCTACGATGTCCATCATAGAAGAACACCAAGTACGGTTGGGACCCAAGAATTCTTCTGCAAAGAGAAAA
AGGGCAGCGGACTTGGGTTCATCTCCAAAAGGAAAACTGAAGAAGAGGTACAAGAGAAAGTCTGCTCTGG
CAATACAGTTATTCAAGTCCGACCAGAGCCCGCCGTCCACAATCAGACTCATTCCGGGAACTCCTGACGT
TGAGGCTTCTTCCTATGAGGACTATTTTTCCCCTGATAATCTCAAGGAGAGGAATTCGGAGAGACTTCCT
CCTGAGGCTCAGCAACTAGCAAGCCCTTCTCTGTTCCACTGCAGAGGTCTCTCAAAGTGGGAGCGAAGAA
ACATGCTGGAAATGTGTGATTTTACCTGCATTGGTGAAAAGCACAGATCCATCAGCAGCATTAGTGACTT
AATTTCAAAAAGTGCCTCTAGTCTTGAGAAACCTGTCAAGGAGGAAGTGAATACAGCTTCTACCTGCTTG
CTTTTGGTGGAGACCTCTGCTAACGACAGCCCAGGGCTTTGCAGTCAGCCTGGCCCTCAGCTGAGGGATG
ACACAGGCCCAGAGGGAAGCAGCCACCCTGACACCCTGTCTAGTTCTGCCCACCACATCACACCCTTGAA
AGGAAATAGTACAGAAACCAGAGACCCAGGTGATGGAAAAGGCTCCCCCAAAGAAGGTAGCACGCCTCCT
GCATCAGCCTCTCCTGAAGATGAAGTACACATCTGTAATCTCAGTTTGGGAGAGGATTGTAATGTAGAAA
AGTCTGTAGAAGAAAAGGAGAACATAGCCACAGGATATAGTGAAAGTGTTAAAAATGGACCAGGGCGGCC
AGATCCTTCAGACAGCTCTTGCACAGGCCTTGTCAGACCTCAGCAGAAACCAAAGAAAAGTGAGAAAGAA
GAAAAGCCAACGAGAACATTGGTCATGACAAGCATGCCATCTGAGAAGCAGACCCTCATCATCCAGGTGG
TGAGCACACTGAAAGGCTTTTCATTCGCACCCGAGGTCTGCGAGACCACCACCCACGTGCTGGTAGGGAA
GTCTGCCCGTACCCTGAACGTGCTGATGGGAATTGCCCGCGGCTGCTGGATTCTTTCTTACGAATGGGTA
CTGTTGTCTTTAGAGTTGGGCCACTGGATTTCTGAGGAGCCTTTTGAACTCTCTGAAACCTTCCCTGCAG
CTCCGATCTGCCGACTTGAACGCCATTTATCTACCCAGCAATACCAAGGAACCCTCTTTGCTAATCAGCC
GAAGATGTTCATAGCGCCAGCCAGCAGCCCTCCCAGAGCCAAACTGTGTGAACTGGTACTCCTGTGTGGT
GGCCAAGTCAGCCCAGCCCCTCAGCTGGCCAGCCTCATCATTGGTCCCTACAAGGGCAAGAAGAAAGCAA
GGATCCAGTACCTGTCAGAGAAATGGGTCTTAGATTCCATCACCCAACACAAGATCTGTGACTTTAACAA
CTACCAACTGCTACAGTGA

Translation (822 aa):
MEASGGVGGAFLKDVVAYVEVWSSKGTENYSRTFAKQLEDMGATVSKTLNKQVTHVIFKDGYQSTWDKAQ
KTGAKLVSVLWVEKCRMAGALVDESLFPAVNTDEHLPNLSRKKHKCMQPKDFILKTPENDKRLQKKFEKM
AEELQRQKAALDDDVPVLLFESPRSLVYSSPVNVMKRRLQDMKEKRENLSPTSSQMLEQSQQNPCVSLFE
TSLNISHQPLSSDESFASGSHSSFGDSCGDQERKLGRSANEMTTVTCPSSPVLRASSFYGSASPNHLRQP
RPQKAPDSPSKESINCQKDATGAVADSERKQAAGVSQGVPDEKLCLSPTMSIIEEHQVRLGPKNSSAKRK
RAADLGSSPKGKLKKRYKRKSALAIQLFKSDQSPPSTIRLIPGTPDVEASSYEDYFSPDNLKERNSERLP
PEAQQLASPSLFHCRGLSKWERRNMLEMCDFTCIGEKHRSISSISDLISKSASSLEKPVKEEVNTASTCL
LLVETSANDSPGLCSQPGPQLRDDTGPEGSSHPDTLSSSAHHITPLKGNSTETRDPGDGKGSPKEGSTPP
ASASPEDEVHICNLSLGEDCNVEKSVEEKENIATGYSESVKNGPGRPDPSDSSCTGLVRPQQKPKKSEKE
EKPTRTLVMTSMPSEKQTLIIQVVSTLKGFSFAPEVCETTTHVLVGKSARTLNVLMGIARGCWILSYEWV
LLSLELGHWISEEPFELSETFPAAPICRLERHLSTQQYQGTLFANQPKMFIAPASSPPRAKLCELVLLCG
GQVSPAPQLASLIIGPYKGKKKARIQYLSEKWVLDSITQHKICDFNNYQLLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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