NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS52804.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52804.1 Public Mus musculus 9 Peak1 23 108 98 CCDS HistoryNCBI Gene:244895Re-query CCDS DB by CCDS ID:52804.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52804.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061552.14 ENSMUSP00000109901.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061552.14Link to Ensembl Protein Viewer:ENSMUSP00000109901.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000061552Re-query CCDS DB by Protein ID:ENSMUSP00000109901
Original member Current member NCBI NM_172924.3 NP_766512.2 Accepted alive Link to Nucleotide Sequence:NM_172924.3Link to Protein Sequence:NP_766512.2Re-query CCDS DB by Nucleotide ID:NM_172924Re-query CCDS DB by Protein ID:NP_766512Link to BLAST:NP_766512.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766512.2 1735 Q69Z38 1735 100% 0 0

Chromosomal Locations for CCDS 52804.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 56206448 56207611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 56227102 56227844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 56241160 56241344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 56257527 56260642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5208 nt):
ATGTCTGCTTGTAACACCTTTACTGAACACGTTTGGAAACCTGGCGAATGCAAGAATTGCTTTAAACCTA
AAAGCTTGCACCAGCTTCCTCCAGACTCTGAGAAGACGCCCATCACCCACGGCAGTGGGAAAACTAATGC
CAATCACAGTAACAACCACCGAGTCAGGAGCACGGGCAACTTCCGGCCCCCTGTGGCTAAAAAGCCCACC
ATCGCTGTGAAGCCCACTATGATGGTGGCAGATGGGCAAAGCGTGTGTGGCGAGCTAAGCATCCAGGAAC
ACTGTGAGAACAAGCCTGTCATCCTGGGGTGGAACCAAAACAAGACGTCCCTGAGCCAGAAACCACTTAA
CAACAATTCTGAAGGTGATGCTGAAGGCTTTGGCAGTGATCCTCAGCAGTGTGCCAATAATGACAGTGCA
CAGAAGATATCCAATAACAACAACGGGCTAACTGAAGTGCTAAAGGAGATAGCGGGCCTGGAAGCCACCC
CTCCGGTCAGAGGAAATGAAACAAACGCCAGAGAAACATTCTTGGGAAGAATAAATGATTGCTACAAACG
ATCGTTGGAAAGAAAGATCCCACCCAGTTGCATGACCGGGAGCATGAAGGACTCTCAGGGCAAACACGTC
ATCCTGAGCGGGAGCGCCGAGGTCATCAGTAACGAAGGGGGCAGGTTCTGCTACCCTGAGTTCTCCAGTG
GTGAGGAGAGTGAGGAAGATGTGCTTTTCAGTAACATGGAGGAGGAGCATGAGAGCTGGGATGAGAGCGA
TGAAGAGCTGTTGGCCATGGAGATTCGCATGAGAGGGCAGCCTCGCTTTGCTAACTTCAGGGCAAACACC
CTGTCTCCTGTTCGATTCTTTGTGAGCAAAAAGTGGAATACTATCCCCTTACGGAATAAGTCTCTGCAGA
GAATCTGTGCTGTGGACTATGACGACAGCTATGATGAAATCCTGAATGGTTATGAGGAAAATTCTGGGGT
CTCCTATGGTCAAGGAAGCGTTCAGAGCACAATATCATCTGACTGCACATCACCAGGCTCCTCCTTCACA
GAAGAGTCACGCTCTGAAACAGCCAGCAGTTTATCCCAGAAGGTCTGTAATGGGGGGATATCTCCTGGTA
ACCCAGGAAATTCTAAGGACATAGCAGAAACTGAGTCTAATTTTGAAAGTCCTCCTGGTAACAATGAGGA
GAAGGACGAATCACTGACTTCCAAAAGCTCGGTGAAAGTTCCAGAGACGCACAAAGCTGTCCTTGCTCTC
CGTTTACAGGAGAAGGATGGCAAGATTGCAGTACATACTGAGAAGCCAGAGAGCAAAGCTTCTACAGATA
TCGCTGGCCAGGCAGTCACCATAAGCCTCGTCCCAGTAGAAGAACAGACAAAGCCCTACCGTGTGGTAAA
TCTGGAACAGCCGCTGTGTAAGCCATATACCGTTGTGGATGTGTCGGCAGCCATGGCCAGCGAGCACCTG
GGGCGACCCAAGATAAAAGGTTCATCTTCTACTCCAAACTCTCCAGTTACATCACCTGCATTGACACCAG
GACAAATAAATGCCCATCTCAAAAAATCCAGTGCAATCCGATACCAGGAAGTGTGGACGTCCAGCACCAG
TCCACGACAAAAGATCCCTAAAATAGAATTAAGTACTGGGGGACCTGGGCCAAATGTCCCTCCAAGGAAA
AACTGCCATAAGTCGGCGCCCACTTCACCCACGGCTACAAACATCTCCTCTAAAACCATCCCTGTTAAGT
CACCTAATTTGTCTGAAATAAAATTTAATAGTTACAACAATGCCGGGATGCCACCTTTTCCCATTATCAT
CCATGATGAGCCATCCTATGCCCGGAGTTCCAAAAATGCCATTAAAGTCCCCATTGTTATTAATCCAAAT
GCGTATGACAATCTCGCCATCTACAAAAGTTTTCTGGGAACAAGTGGAGAACTCTCTGTGAAGGAAAAAA
CCACAAGCGTAATAAGCCATACTTACGAAGAAATAGAAACTGAAAGCAAAGTGTCTGATAGCACCCCCAG
CAAGCTCACAGACTGTCCCCAAGCTAAAGGGTTTTCCAACAGCACAGAGCGGAAAAGAGGCTCAGTAGCG
CAGAAGGTGCAGGAGTTTAACAATTGTCTCAACAGAGGTCAGTCTTCTCCACAAAGAAGCTACAGTTCCA
CCCACAGCTCCCCAGCAAAAATCCAGAGACCCACTCAAGAGCCTGCGGGCAAAACGGAAGGGGCACAAGG
GTCTCAGGTGCCAGGCAGCAGCAGCAACAGCACTAGGGAGAAAGCAAGCGCCGTCCTATGTCAGATTGTG
GCATCTATCCAACCCCCCCAGACTCCTCCAGAAGCACCTCAATCTAGCCCTAAGGCTTGCAGTGTGGAAG
AGCTTTATGCCGTTCCCCCAGATGCAGATACTACAAAAAGTATTCCTAAAAACCCACCAGTCAGACCCAA
ATCTCTTTTTACATCTCAGTCTAGTGGGGAAGGTGAGGCCCATCAGACCACAGAAAGCCCTACTGCCAAA
ATTCAGAAAGATCCATCCACGAAGCCAGTGACTTCTCCTCCCTCCAAATTAGTGACGAGCGCCCAGAGTG
AGCCACCGCCTCCCTTTCCCCCACCACGGTCTACTTCCTCCCCTTACCATGCAAGTAACCTGTTGCAAAG
GCATTTTACCAATTGGACGAAGCCAACCAGTCCTACCCGATCAACAGAAGCTGAATCAATTTTGCACTCT
GAAGGCAGCAGGCGAGCCGCTGATGCAAAACCTAAACGCTGGATATCATTTAAAAGCTTCTTCCGCCGCC
GCAAAACAGATGAGGAAGAAGAGAAGGAGAAAGAGCGAGAGAAAGGGAAGCTGGTGGGCCTGGACGGGAC
AGTCATCCACATGCTGCCGCCCCCTCCAGTCCAGCGCCATCACTGGTTCACAGAGGCCAAAGGAGAGGCC
AGCGAGAAGCCTGCTATAGTCTTCATGTACAGGTGTGACCCTGACCAAGGCCACCTCAGTGTGGACCAAA
GCAAGGCTGGGGCAGAGAAAGGAAGAGCAGAGGAGGTGTTACTGCGGAACTCGGAAGAGAAGAAAAGTAG
CTATCTTCCATCACAGATTCCTGACAAAGCTTGCAGTCGTGTGACCCATGAAGTGGCAGGAGAACTTTCT
CCTCGGGATCCAAGAACTCCTGCTGGGAAGCAAGATGGCACTTCAGTCACACCAACACTGCCTCCACCTG
ACCTGGAAAGGGAAGAAGAAAAAGATGACACTTTGGATCCTACTGACGTGAGTCCCTGCAGTGCAACCTA
CAGCAACCTAGGACAATCTCGAGCAGCTATGATACCTCCCAAGCATCCACGGCATCCCAAGGGAGCGGTG
GATGATGCCATTGCCTTTGGAGAGAAGACAGACCAAGAAGGACTGAATGCTTCCCAACCCACACCACCCC
CACTGCCAAAGAAAATGATACGAGCCAATACCGAGCCCATCTCCAAAGACCTTCAGAAAGCCATGGAAAG
CAGTCTTTGCGTCATGGCTAATCCCACCTACGATATTGATCCCAACTGGGATGCCAGCAGTGCTGGGTCT
TCTATTAGCTATGAACTCAAGGGACTAGACGTTGAGTCTTATGAATCCTTGGAGAGACCTTTGCATAAGG
AGAGACCCGTTCCTTCAGCAGCAAACAGTATCTCCAGCCTAGCCACTCTCAGTGTTAAGGACAGATTTTC
TAACAGTATGGAGTCACTCTCCAGTCGACGTGGTCTCTCCTATAGACAGACTCGAAGCATCCAGAAGCCA
CAGAGACAAGCACTTTATCGAGGACTTGACAATCGGGAGGAAGTGGTGGGTAAACTCCGAAGCCTTCATA
CAGATGCCTTGAAGAGACTGGCAGTTAAATGTGAAGACCTCTTCATGGCTGGGCAGAAAGACCAACTCCG
CTTTGGAGTAGACAGCTGGTCAGACTTCAGGCTAACCAGCGACAAACCGTGCTGCGAAGCTGGAGATGCG
GTTTACTACACTGCCTCGTATGCAAAAGATCCACTCAGTAACTATGCAGTCAAGATCTGCAAGAGCAAAG
CTAAGGAGTCTCAGCAGTATTACCATAGCCTGGCTGTCCGGCAGAGTCTGCCTGTGCATTTTAACATCCA
GCAGGATTGTGGCCATTTCCTTGCTGAAGTCCCTAGTCGTCTGCTTCCCTGGGAGGATCCTGATGCTCCT
GAAAAGGCAGAGGATGGCACTGAAGACAGCGAAGAAGAGGGGAAGGCAGAAACTTTGGGGGGAAATCCTG
AGCCCTGCTCTGAAACAGAGCCATCCCAGAAAGAGAACCAACGAGTCACAAACAGGAAACAAAGAAGCCA
CGTTGTGGTCATCACCAGGGAGGTTCCCCATCTCACTGTGGCCGACTTCGTGCGAGATTCTTTGGCCCAT
CATGGGAACAGCCCTGACTTGTATGAGAGGCAAGTGTGTCTGCTGCTCTTACAGCTGTGCTCTGGGCTTG
AGCACCTCAAGCCCTACCACGTCACGCACTGCGATCTTCGCCTGGAGAACTTGCTGCTTGTCCAGCACCA
ACCTGGGGGAGCTGCCCAGGGCCCTTCTCCTGCAGACCCTTGCCCCACCTTAGCTTGTCCTACAAGGCTC
ATTGTGAGTAACTTCTCTCAGGCCAAGCAGAAGAGCCACCTGGTGGACCCCCAGATCCTCCGAGACCAGT
CCCGCCTTGCCCCAGAGATCATCACGGCCACCCAGTATAAGAAGTGTGATGAATTCCAGACGGGCATTCT
CATCTATGAGATGCTGCACCTGCCCAACCCTTTTGACGAGAACCCGGAGCTGAAGGAGAAGGAGTACACG
CGCACAGATCTGCCTCGGATCCCTCTCCGCTCCCCGTACTCCTGGGGTCTACAGCAGCTTGCTAGCTGCC
TCCTGAATCCCAACCCTTCTGAGCGCATCCTCATTTCTGACGCCAAAGGCATCCTCCAATGTCTGCTCTG
GGGCCCCCGAGAAGATCTCTTTCAAATCTTCACCACCTCTGCAACCCTCGCACAGAAGAACGCTCTGCTC
CAAAACTGGTTAGACATCAAGCGAACCCTGCTGATGATCAAGTTCGCGGAGAAGTCCCTGGACAGAGAGG
GGGGCATCAGCCTGGAGGACTGGCTTTGTGCTCAGTATCTGGCCTTTGCCACTACAGACTCCCTGAGCTA
TATTGTAAAAATCCTGCAATACCGTTAA

Translation (1735 aa):
MSACNTFTEHVWKPGECKNCFKPKSLHQLPPDSEKTPITHGSGKTNANHSNNHRVRSTGNFRPPVAKKPT
IAVKPTMMVADGQSVCGELSIQEHCENKPVILGWNQNKTSLSQKPLNNNSEGDAEGFGSDPQQCANNDSA
QKISNNNNGLTEVLKEIAGLEATPPVRGNETNARETFLGRINDCYKRSLERKIPPSCMTGSMKDSQGKHV
ILSGSAEVISNEGGRFCYPEFSSGEESEEDVLFSNMEEEHESWDESDEELLAMEIRMRGQPRFANFRANT
LSPVRFFVSKKWNTIPLRNKSLQRICAVDYDDSYDEILNGYEENSGVSYGQGSVQSTISSDCTSPGSSFT
EESRSETASSLSQKVCNGGISPGNPGNSKDIAETESNFESPPGNNEEKDESLTSKSSVKVPETHKAVLAL
RLQEKDGKIAVHTEKPESKASTDIAGQAVTISLVPVEEQTKPYRVVNLEQPLCKPYTVVDVSAAMASEHL
GRPKIKGSSSTPNSPVTSPALTPGQINAHLKKSSAIRYQEVWTSSTSPRQKIPKIELSTGGPGPNVPPRK
NCHKSAPTSPTATNISSKTIPVKSPNLSEIKFNSYNNAGMPPFPIIIHDEPSYARSSKNAIKVPIVINPN
AYDNLAIYKSFLGTSGELSVKEKTTSVISHTYEEIETESKVSDSTPSKLTDCPQAKGFSNSTERKRGSVA
QKVQEFNNCLNRGQSSPQRSYSSTHSSPAKIQRPTQEPAGKTEGAQGSQVPGSSSNSTREKASAVLCQIV
ASIQPPQTPPEAPQSSPKACSVEELYAVPPDADTTKSIPKNPPVRPKSLFTSQSSGEGEAHQTTESPTAK
IQKDPSTKPVTSPPSKLVTSAQSEPPPPFPPPRSTSSPYHASNLLQRHFTNWTKPTSPTRSTEAESILHS
EGSRRAADAKPKRWISFKSFFRRRKTDEEEEKEKEREKGKLVGLDGTVIHMLPPPPVQRHHWFTEAKGEA
SEKPAIVFMYRCDPDQGHLSVDQSKAGAEKGRAEEVLLRNSEEKKSSYLPSQIPDKACSRVTHEVAGELS
PRDPRTPAGKQDGTSVTPTLPPPDLEREEEKDDTLDPTDVSPCSATYSNLGQSRAAMIPPKHPRHPKGAV
DDAIAFGEKTDQEGLNASQPTPPPLPKKMIRANTEPISKDLQKAMESSLCVMANPTYDIDPNWDASSAGS
SISYELKGLDVESYESLERPLHKERPVPSAANSISSLATLSVKDRFSNSMESLSSRRGLSYRQTRSIQKP
QRQALYRGLDNREEVVGKLRSLHTDALKRLAVKCEDLFMAGQKDQLRFGVDSWSDFRLTSDKPCCEAGDA
VYYTASYAKDPLSNYAVKICKSKAKESQQYYHSLAVRQSLPVHFNIQQDCGHFLAEVPSRLLPWEDPDAP
EKAEDGTEDSEEEGKAETLGGNPEPCSETEPSQKENQRVTNRKQRSHVVVITREVPHLTVADFVRDSLAH
HGNSPDLYERQVCLLLLQLCSGLEHLKPYHVTHCDLRLENLLLVQHQPGGAAQGPSPADPCPTLACPTRL
IVSNFSQAKQKSHLVDPQILRDQSRLAPEIITATQYKKCDEFQTGILIYEMLHLPNPFDENPELKEKEYT
RTDLPRIPLRSPYSWGLQQLASCLLNPNPSERILISDAKGILQCLLWGPREDLFQIFTTSATLAQKNALL
QNWLDIKRTLLMIKFAEKSLDREGGISLEDWLCAQYLAFATTDSLSYIVKILQYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH