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Report for CCDS32204.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32204.1 Public Homo sapiens 15 PLA2G4F 24 110 108 CCDS HistoryNCBI Gene:255189Re-query CCDS DB by CCDS ID:32204.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32204.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397272.7 ENSP00000380442.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397272.7Link to Ensembl Protein Viewer:ENSP00000380442.4Re-query CCDS DB by Nucleotide ID:ENST00000397272Re-query CCDS DB by Protein ID:ENSP00000380442
Original member Current member NCBI NM_213600.4 NP_998765.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_213600.4Link to Protein Sequence:NP_998765.3Re-query CCDS DB by Nucleotide ID:NM_213600Re-query CCDS DB by Protein ID:NP_998765Link to BLAST:NP_998765.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_998765.3 849 Q68DD2-1 849 100% 0 0

Chromosomal Locations for CCDS 32204.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 42141984 42142204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42142528 42142714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42143978 42144144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42144450 42144644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42145575 42145682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42145766 42145903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42146127 42146241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42147124 42147346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42147626 42147762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42149713 42149848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42150104 42150141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42150373 42150486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42150608 42150777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42152688 42152754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42153300 42153342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42153620 42153660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42154092 42154220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42154322 42154458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42155517 42155589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42156439 42156549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2550 nt):
ATGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGACAAGATGCTGCCCCTCCTGGGGGCAGTGCTGCTTC
AGAAGAGAGAGAAGAGGGGCCCTCTGTGGAGGCACTGGCGGCGGGAAACCTACCCATACTATGACCTCCA
GGTGAAGGTGCTGAGGGCCACAAACATCCGGGGCACAGACCTGCTGTCCAAAGCCGACTGCTATGTGCAA
CTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACTAGGATAGTGGCCAACTGCAGTGACCCCGAGT
GGAATGAGACCTTCCACTACCAGATCCATGGTGCTGTGAAGAACGTCCTGGAGCTCACCCTCTATGACAA
GGACATCCTGGGCAGCGACCAGCTCTCTCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGGCCAACCT
CACAAACACACCTTCCCACTCAACCACCAGGATTCACAAGAGCTGCAGGTGGAATTTGTTCTGGAGAAGA
GCCAGGTGCCTGCATCTGAAGTCATCACCAACGGGGTTCTGGTGGCTCACCCCTGTCTGAGAATCCAGGG
CACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCT
GGAGCCTACGAGAAGCCACAGCTCTTGCCCCTGCAGCCTCCCACAGAGCCAGGCCTCCCACCCACCTTTA
CCTTCCACGTGAACCCAGTGCTGAGCTCCAGGCTACACGTGGAGCTGATGGAGCTGCTGGCAGCTGTGCA
GAGTGGCCCCAGCGCAGAGTTGGAGGCTCAGACCAGCAAGCTGGGCGAGGGGGGCATCCTGCTCTCCTCT
CTGCCCCTAGGCCAGGAGGAACAGTGTTCTGTGGCCCTGGGGGAGGGCCAGGAGGTGGCTCTGAGCATGA
AGGTGGAAATGAGCTCCGGGGACCTAGACCTACGCCTTGGCTTTGACCTCTCTGACGGGGAGCAGGAGTT
TCTGGACAGGAGGAAGCAGGTCGTGTCCAAGGCCCTGCAGCAAGTGCTGGGATTGAGTGAGGCTCTGGAC
AGTGGCCAGGTGCCTGTAGTGGCTGTGTTGGGTTCCGGGGGTGGAACCCGAGCCATGTCTTCTCTGTACG
GCAGCCTGGCAGGGTTGCAGGAGCTCGGCCTTCTAGACACTGTGACCTACCTGAGTGGGGTCTCTGGGTC
TACCTGGTGCATCTCCACACTCTACAGGGACCCAGCCTGGTCCCAGGTGGCCTTGCAGGGCCCCATTGAG
CGTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTTTGTCCACGGAGCGGCTACAGTACTACACTC
AGGAACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTCCTTGTTGA
GTATCTCCTGTACCAGGAGGAGAACCCTGCCAAGCTGTCTGACCAACAGGAGGCGGTCCGCCAGGGTCAG
AACCCTTACCCCATTTACACCAGTGTCAACGTCCGCACCAACTTGAGTGGGGAAGATTTTGCAGAGTGGT
GCGAGTTCACGCCCTATGAGGTTGGCTTCCCCAAGTACGGGGCTTATGTTCCCACCGAGCTCTTCGGCTC
AGAACTCTTCATGGGACGATTGCTGCAGCTCCAGCCTGAACCCCGGATCTGTTACCTGCAAGGTATGTGG
GGCAGCGCCTTTGCCACCAGCCTGGATGAGATCTTCCTAAAGACCGCCGGCTCGGGCCTCAGCTTCCTGG
AGTGGTACAGAGGCAGTGTGAATATCACAGACGACTGCCAGAAGCCTCAGCTGCACAACCCCTCGAGGCT
GCGAACGAGGCTCCTCACCCCACAGGGGCCCTTCTCCCAGGCTGTGCTGGACATATTCACCTCCCGCTTC
ACTTCCGCCCAGAGCTTTAACTTCACCCGGGGTCTCTGCTTGCACAAGGACTATGTGGCTGGCAGGGAGT
TCGTGGCCTGGAAAGACACACACCCGGACGCCTTCCCCAACCAGCTCACCCCCATGCGGGACTGCCTGTA
CCTGGTGGACGGAGGCTTTGCCATCAACTCTCCGTTCCCACTGGCTCTGCTGCCTCAGAGAGCAGTGGAC
CTCATTCTGTCCTTTGACTATTCCTTGGAAGCCCCTTTTGAGGTCTTGAAGATGACAGAGAAGTACTGCC
TGGACCGAGGAATCCCCTTCCCTAGCATCGAGGTGGGCCCTGAGGACATGGAGGAGGCCCGTGAGTGCTA
TCTGTTTGCCAAGGCTGAGGACCCCCGCTCCCCCATTGTGCTGCACTTCCCCCTGGTTAACCGTACCTTC
CGCACACACCTGGCCCCAGGTGTGGAGCGACAAACAGCTGAGGAGAAGGCCTTTGGGGACTTTGTCATCA
ACAGGCCAGACACCCCCTATGGCATGATGAACTTCACCTATGAGCCCCAGGACTTTTATCGGCTGGTGGC
CCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGG
CACCAGGCTCGGGAGAGGGCAGGGGCCTGA

Translation (849 aa):
MLWALWPRWLADKMLPLLGAVLLQKREKRGPLWRHWRRETYPYYDLQVKVLRATNIRGTDLLSKADCYVQ
LWLPTASPSPAQTRIVANCSDPEWNETFHYQIHGAVKNVLELTLYDKDILGSDQLSLLLFDLRSLKCGQP
HKHTFPLNHQDSQELQVEFVLEKSQVPASEVITNGVLVAHPCLRIQGTLRGDGTAPREEYGSRQLQLAVP
GAYEKPQLLPLQPPTEPGLPPTFTFHVNPVLSSRLHVELMELLAAVQSGPSAELEAQTSKLGEGGILLSS
LPLGQEEQCSVALGEGQEVALSMKVEMSSGDLDLRLGFDLSDGEQEFLDRRKQVVSKALQQVLGLSEALD
SGQVPVVAVLGSGGGTRAMSSLYGSLAGLQELGLLDTVTYLSGVSGSTWCISTLYRDPAWSQVALQGPIE
RAQVHVCSSKMGALSTERLQYYTQELGVRERSGHSVSLIDLWGLLVEYLLYQEENPAKLSDQQEAVRQGQ
NPYPIYTSVNVRTNLSGEDFAEWCEFTPYEVGFPKYGAYVPTELFGSELFMGRLLQLQPEPRICYLQGMW
GSAFATSLDEIFLKTAGSGLSFLEWYRGSVNITDDCQKPQLHNPSRLRTRLLTPQGPFSQAVLDIFTSRF
TSAQSFNFTRGLCLHKDYVAGREFVAWKDTHPDAFPNQLTPMRDCLYLVDGGFAINSPFPLALLPQRAVD
LILSFDYSLEAPFEVLKMTEKYCLDRGIPFPSIEVGPEDMEEARECYLFAKAEDPRSPIVLHFPLVNRTF
RTHLAPGVERQTAEEKAFGDFVINRPDTPYGMMNFTYEPQDFYRLVALSRYNVLNNVETLKCALQLALDR
HQARERAGA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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