NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS54329.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54329.1 Public Homo sapiens 19 ZNF135 24 110 108 CCDS HistoryNCBI Gene:7694Re-query CCDS DB by CCDS ID:54329.1Re-query CCDS DB by GeneID:7694See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54329.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000401053.8 ENSP00000441410.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000401053.8Link to Ensembl Protein Viewer:ENSP00000441410.1Re-query CCDS DB by Nucleotide ID:ENST00000401053Re-query CCDS DB by Protein ID:ENSP00000441410
Original member Current member NCBI NM_007134.1 NP_009065.1 Accepted alive Link to Nucleotide Sequence:NM_007134.1Link to Protein Sequence:NP_009065.1Re-query CCDS DB by Nucleotide ID:NM_007134Re-query CCDS DB by Protein ID:NP_009065Link to BLAST:NP_009065.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009065.1 682 P52742-4 682 100% 0 0

Chromosomal Locations for CCDS 54329.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 58059242 58059310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58061580 58061706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58063446 58063541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58066705 58068461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2049 nt):
ATGGAGTTAGGCTCGCGCCGGCGCAGTGTCGGCTGCCGGTGCCGCGGCCTTTGTCTCGCAGTCAGGAGGG
AGCAAGTGACGTTTGAGGACGTGGTAGTGGGCTTCAGCCAGGAGGAGTGGGGGCAGCTGAAGCCTGCCCA
GAGGACCCTGTACCGTGATGTAATGCTGGACACCTTCAGGCTTCTGGTCTCTGTGGGACATTGGTTACCG
AAGCCGAATGTCATCTCCCTGCTGGAGCAAGAGGCAGAGCTGTGGGCGGTGGAGTCTAGACTTCCCCAAG
GCGTGTACCCAGAGATTAAGGGACATTTCCAGTTTTTGCTTCTTTCAGACTTGGAAACTAGACCCAAAGT
CAAACTGTCAGTTCTAAAGCAAGGCATCTCTGAAGAAATATCCAACAGTGTCATCTTGGTAGAAAGATTC
CTGTGGGATGGTCTGTGGTACTGCAGGGGTGAGGACACTGAGGGCCACTGGGAATGGAGTTGTGAGAGTC
TAGAGAGCCTGGCAGTGCCGGTGGCCTTCACGCCTGTGAAGACGCCTGTTCTGGAGCAGTGGCAGAGGAA
TGGGTTTGGGGAAAACATAAGTCTGAACCCTGATCTCCCACATCAACCAATGACTCCTGAAAGACAAAGC
CCCCACACATGGGGAACACGTGGAAAAAGGGAGAAGCCAGACCTAAATGTTTTACAGAAAACCTGTGTAA
AAGAGAAACCCTACAAATGTCAGGAATGCGGAAAGGCCTTTAGTCACAGCTCAGCACTTATCGAACACCA
CCGGACGCACACAGGAGAGAGACCTTACGAATGTCACGAATGCTTAAAAGGCTTCCGGAACAGCTCGGCA
CTTACCAAACACCAGAGAATCCATACTGGGGAGAAACCCTATAAATGCACTCAGTGTGGGAGGACCTTCA
ACCAAATTGCCCCACTGATCCAGCACCAGAGAACTCACACAGGTGAGAAGCCCTATGAATGCAGCGAATG
TGGGAAATCCTTCAGTTTTAGGTCCTCCTTCAGCCAGCACGAGCGAACTCACACAGGCGAGAAGCCCTAC
GAGTGCAGTGAGTGTGGGAAAGCCTTCCGGCAAAGCATCCACCTCACCCAGCATCTGCGAATCCACACTG
GGGAGAAACCCTATCAGTGTGGTGAGTGTGGCAAGGCCTTCAGCCACAGCTCATCCTTGACCAAACACCA
GCGAATCCACACAGGGGAGAAGCCCTACGAGTGCCATGAGTGTGGAAAAGCCTTCACCCAGATCACACCA
CTGATTCAGCACCAGAGGACCCACACAGGAGAAAAGCCCTATGAGTGTGGTGAGTGTGGGAAAGCCTTCA
GTCAGAGCACACTCCTGACCGAGCATCGGAGGATTCACACAGGAGAGAAGCCCTATGGATGCAACGAGTG
TGGGAAAACCTTCAGCCACAGCTCCTCACTCAGCCAGCATGAGCGGACACACACAGGAGAGAAGCCCTAT
GAGTGCAGTCAGTGTGGGAAGGCCTTCCGGCAGAGCACACACCTCACCCAACACCAGCGAATCCACACAG
GGGAGAAGCCCTATGAATGCAATGACTGCGGCAAGGCATTCAGTCACAGCTCGTCCCTCACCAAACATCA
GCGAATCCACACTGGGGAGAAGCCCTACGAATGCAACCAGTGTGGCAGAGCCTTCAGCCAGCTTGCTCCC
CTCATTCAGCATCAGAGGATCCACACAGGAGAGAAACCCTATGAATGTAACCAGTGTGGCAGAGCCTTCA
GCCAGAGCTCCCTTCTCATCGAACACCAGAGGATTCACACCAAGGAAAAGCCGTATGGGTGCAATGAGTG
TGGGAAATCCTTCAGCCACAGCTCCTCGCTCAGCCAGCACGAAAGGACGCACACTGGGGAAAAGCCCTAT
GAGTGTCACGATTGCGGAAAGTCCTTTAGGCAGAGCACCCACCTCACTCAGCACCGGAGGATCCACACAG
GAGAGAAGCCATATGCATGCAGGGACTGTGGAAAGGCCTTTACCCACAGCTCCTCCCTTACCAAGCACCA
GAGAACTCACACTGGATAA

Translation (682 aa):
MELGSRRRSVGCRCRGLCLAVRREQVTFEDVVVGFSQEEWGQLKPAQRTLYRDVMLDTFRLLVSVGHWLP
KPNVISLLEQEAELWAVESRLPQGVYPEIKGHFQFLLLSDLETRPKVKLSVLKQGISEEISNSVILVERF
LWDGLWYCRGEDTEGHWEWSCESLESLAVPVAFTPVKTPVLEQWQRNGFGENISLNPDLPHQPMTPERQS
PHTWGTRGKREKPDLNVLQKTCVKEKPYKCQECGKAFSHSSALIEHHRTHTGERPYECHECLKGFRNSSA
LTKHQRIHTGEKPYKCTQCGRTFNQIAPLIQHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPY
ECSECGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGKAFTQITP
LIQHQRTHTGEKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPY
ECSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQCGRAFSQLAP
LIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKPY
ECHDCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHSSSLTKHQRTHTG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH