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Report for CCDS29666.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29666.1 Public Mus musculus 19 Or5b123 23 108 98 CCDS HistoryNCBI Gene:258629Re-query CCDS DB by CCDS ID:29666.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29666.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076856.1 ENSMUSP00000076128.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076856.1Link to Ensembl Protein Viewer:ENSMUSP00000076128.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000076856Re-query CCDS DB by Protein ID:ENSMUSP00000076128
Original member Current member EBI ENSMUST00000217061.2 ENSMUSP00000149988.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000217061.2Link to Ensembl Protein Viewer:ENSMUSP00000149988.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000217061Re-query CCDS DB by Protein ID:ENSMUSP00000149988
Original member Current member NCBI NM_146636.2 NP_666847.1 Accepted alive Link to Nucleotide Sequence:NM_146636.2Link to Protein Sequence:NP_666847.1Re-query CCDS DB by Nucleotide ID:NM_146636Re-query CCDS DB by Protein ID:NP_666847Link to BLAST:NP_666847.1

Chromosomal Locations for CCDS 29666.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13619164 13620111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGATTCAGAATATTTCAGAATTGTCTGAATTTATTCTTGTTGGGTTAACAGATGCACCATTCCTGCAAA
TTCCTTTATTTATCATCTTTACTCTCATTTATTTGACAACATTGTTTGGGAATCTTGGGATGATTTTGCT
GATTCTGCTGGACTCCAGACTCCACACTCCCATGTACTTTTTCCTCAGTAACCTCTCTCTGGTGGACTGT
GTTTATGCCTCAGCTGTCACTCCCAAGGTGATGGAAGGGTTTCTCACAGGAAATAAGATCATATCCTACA
ATGCATGTGCTGCCCAGATGTTCTTCTTTGCAGCCTTTGCTACTGTTGAAAGTTTCATGCTGGCCTCAAT
GGCCTATGACCGTCATGCAGCAGTGTGCAAACCCTTGCATTACTCCACTACTATGACAACTACGATATGT
GTCCTGCTTCTTGCTGGATCTTATGTCAGTGGACTCTTACAATCTTCCATTCATGTTTCCTTCACATTTC
AACTCTCCTTCTGCCATTCTAATGTAGTCAATCACTTTTTCTGTGATATCCCACCACTATTAGCCCTTTC
TTGCTCCAGTATTCACACAAATGAAATTATACTCTTTATGTTGGCAGCATTCAATGTTGCTTTTACTCTA
TTAGTTATATTGTCCTCTTACTTACTAATTTTTGTTGCAATTCTGAGAATGCGCTCTGCTGAGAGCAGGA
AGAAGGCCATTTCCACCTGTGCATCCCACCTTACCACTGTTTCCATCTTCTATGGCACAATTATCTTCAT
GTACTTACAGCCCAGCTCCAATCACTCCATGGATACTGACAAGATGGCATCTGTTTTCTACACCATGGTC
ATTCCCATGCTGAACCCTCTTGTATATAGCCTGAGAAATAAAGAAGTCAAGAATGCATTCAAGAAGGTTG
CTGGAAAAGCAGTGCTTTCACTGGGATTAGTCAATTAA

Translation (315 aa):
MIQNISELSEFILVGLTDAPFLQIPLFIIFTLIYLTTLFGNLGMILLILLDSRLHTPMYFFLSNLSLVDC
VYASAVTPKVMEGFLTGNKIISYNACAAQMFFFAAFATVESFMLASMAYDRHAAVCKPLHYSTTMTTTIC
VLLLAGSYVSGLLQSSIHVSFTFQLSFCHSNVVNHFFCDIPPLLALSCSSIHTNEIILFMLAAFNVAFTL
LVILSSYLLIFVAILRMRSAESRKKAISTCASHLTTVSIFYGTIIFMYLQPSSNHSMDTDKMASVFYTMV
IPMLNPLVYSLRNKEVKNAFKKVAGKAVLSLGLVN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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