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Report for CCDS21551.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21551.1 Public Mus musculus 7 Or51a8 23 108 98 CCDS HistoryNCBI Gene:259114Re-query CCDS DB by CCDS ID:21551.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21551.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098215.2 ENSMUSP00000095817.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098215.2Link to Ensembl Protein Viewer:ENSMUSP00000095817.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098215Re-query CCDS DB by Protein ID:ENSMUSP00000095817
Original member Current member EBI ENSMUST00000209778.2 ENSMUSP00000148181.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000209778.2Link to Ensembl Protein Viewer:ENSMUSP00000148181.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000209778Re-query CCDS DB by Protein ID:ENSMUSP00000148181
Original member Current member NCBI NM_147110.2 NP_667321.1 Accepted alive Link to Nucleotide Sequence:NM_147110.2Link to Protein Sequence:NP_667321.1Re-query CCDS DB by Nucleotide ID:NM_147110Re-query CCDS DB by Protein ID:NP_667321Link to BLAST:NP_667321.1

Chromosomal Locations for CCDS 21551.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 102900369 102901307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGATTCTCAATACCTCCGAGGTCGAAATCTCTTCATTCCTACTGATTGGGATCCCAGGCTTTGAGCATA
TGCACATTTGGATTTCCATCCCTATCTGCCTCATGTACCTGACAGCTATCCTGGGAAACTGCACCATCCT
CTGTGTCATCAGAACAGAGCCTTCTCTGCATGAGCCCATGTACTATTTTCTCTCCATGTTGGCCTTCTCT
GATCTAGGTCTGTCTTTCTCCTCCATCCCCACTATGCTAAGAATATTCTTGTTCAATGCCATGGGGATTT
CCACTGATGCCTGCATTGCCCAGGAATTCTTCATCCATGGATTCACAGACATGGAATCTTCAGTGCTCCT
CATTATGTCCTTTGATCGCTTTGTAGCCATTCGGCACCCCCTAAGATACAGTGCCATCCTCACAAGCTCC
AGGGTTGTGCAAATTGGGCTAGCCTTTTCTGTTAAAAGCATTCTCCTGGTGCTTCCCCTTCCATTCACTT
TAAAGAGACTCAGATACTGCAATAAACGCCTCTTGTCACACTCCTATTGTCTCCACCAGGATGTCATGAA
GCTGGCGTGCTCTGACAACAGGGTTAACTTTTACTATGGGCTGTTCGTTGCACTCTGCATGATGTCAGAC
AGTGTGTTCATTGCTGTGTCTTACGTGTTCATCTTGAAGACAGTGTTGGGTATTGCATCCCATGGGGAGA
GGCTCAAAGCTCTTAATACTTGTGTATCCCATATCTGTGCTGTGCTCATTTTCTATGTCCCTATCATTAC
CTTAGCTACCATGCATCGCTTTGCAAAACATAAATCTCCATTAGCTATGATTCTGATAGCAGATGCTTTC
TTGCTGGTACCACCTTTGATGAATCCCATTGTGTATTGTGTTAAAACTAGGCAGATAAGAGTAAAAGTTT
TAGAAAAACTGGGTCTGCATTCTAAGTAA

Translation (312 aa):
MILNTSEVEISSFLLIGIPGFEHMHIWISIPICLMYLTAILGNCTILCVIRTEPSLHEPMYYFLSMLAFS
DLGLSFSSIPTMLRIFLFNAMGISTDACIAQEFFIHGFTDMESSVLLIMSFDRFVAIRHPLRYSAILTSS
RVVQIGLAFSVKSILLVLPLPFTLKRLRYCNKRLLSHSYCLHQDVMKLACSDNRVNFYYGLFVALCMMSD
SVFIAVSYVFILKTVLGIASHGERLKALNTCVSHICAVLIFYVPIITLATMHRFAKHKSPLAMILIADAF
LLVPPLMNPIVYCVKTRQIRVKVLEKLGLHSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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