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Report for CCDS7965.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7965.1 Public Homo sapiens 11 ZDHHC5 24 110 108 CCDS HistoryNCBI Gene:25921Re-query CCDS DB by CCDS ID:7965.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7965.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000287169.8 ENSP00000287169.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000287169.8Link to Ensembl Protein Viewer:ENSP00000287169.3Re-query CCDS DB by Nucleotide ID:ENST00000287169Re-query CCDS DB by Protein ID:ENSP00000287169
Original member Current member NCBI NM_015457.3 NP_056272.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015457.3Link to Protein Sequence:NP_056272.2Re-query CCDS DB by Nucleotide ID:NM_015457Re-query CCDS DB by Protein ID:NP_056272Link to BLAST:NP_056272.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056272.2 715 Q9C0B5-1 715 100% 0 0

Chromosomal Locations for CCDS 7965.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 57673091 57673194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57682422 57682543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57688508 57688665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57690031 57690203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57690335 57690437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57692611 57692702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57693783 57693915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57695920 57696043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57696761 57696873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57698559 57699418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57699866 57700031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2148 nt):
ATGCCCGCAGAGTCTGGAAAGAGATTCAAACCCAGCAAGTATGTCCCGGTCTCTGCAGCCGCCATCTTCC
TAGTGGGAGCTACGACACTCTTCTTTGCCTTTACGTGTCCAGGACTAAGCCTGTATGTGTCACCTGCAGT
GCCCATCTACAATGCAATTATGTTTCTCTTTGTGTTGGCCAACTTCAGCATGGCCACCTTCATGGACCCA
GGGATTTTCCCTCGAGCTGAGGAGGATGAGGACAAGGAAGATGATTTCCGAGCTCCCCTTTACAAAACAG
TGGAGATAAAGGGCATCCAGGTGCGCATGAAATGGTGTGCCACCTGCCGCTTTTACCGTCCCCCTCGATG
TTCCCACTGCAGTGTCTGTGACAACTGTGTGGAGGAATTTGATCATCACTGCCCCTGGGTGAATAACTGT
ATTGGTCGCCGGAACTACCGTTATTTTTTCCTTTTCCTCCTTTCCCTGACAGCCCACATTATGGGTGTGT
TTGGCTTTGGCCTCCTTTATGTCCTCTACCACATAGAGGAACTCTCAGGGGTCCGCACGGCTGTCACAAT
GGCAGTAATGTGTGTGGCTGGCTTATTCTTCATCCCTGTAGCTGGCCTCACGGGATTTCACGTGGTTCTG
GTGGCCAGGGGACGCACAACCAATGAACAGGTTACGGGTAAATTCCGGGGAGGTGTGAACCCCTTCACCA
ATGGCTGCTGTAACAATGTCAGCCGTGTTCTCTGCAGTTCTCCAGCACCCAGGTATTTGGGGAGACCAAA
GAAAGAGAAGACAATTGTAATCAGACCTCCCTTCCTTCGACCAGAAGTTTCAGATGGGCAGATAACTGTG
AAGATCATGGATAATGGCATCCAGGGAGAGCTGAGGAGAACAAAGTCTAAGGGAAGCCTGGAGATAACAG
AGAGCCAGTCTGCAGATGCTGAACCTCCACCTCCTCCTAAGCCAGACCTGAGCCGTTACACAGGGTTGCG
AACACACCTCGGCTTGGCTACTAATGAGGATAGTAGCTTATTGGCCAAGGACAGCCCCCCGACACCTACC
ATGTACAAGTATCGGCCGGGTTACAGTAGCAGCAGTACGTCAGCTGCCATGCCGCATTCCTCCAGCGCCA
AGTTGAGTCGTGGGGACAGCTTGAAGGAGCCAACCTCAATTGCAGAGAGCAGCCGTCACCCCAGCTACCG
CTCAGAGCCCAGCTTGGAACCAGAGAGCTTCCGTTCTCCTACCTTTGGCAAAAGTTTTCACTTCGATCCA
CTATCCAGTGGCTCACGCTCCTCCAGCCTCAAGTCAGCCCAGGGCACAGGCTTTGAGCTGGGCCAGTTGC
AATCCATTCGTTCAGAGGGCACCACCTCCACCTCCTATAAGAGCCTGGCCAACCAGACACGCAATGGAAG
CCTATCTTATGACAGCTTGCTCACACCTTCAGACAGCCCTGATTTTGAGTCAGTGCAGGCAGGGCCTGAG
CCAGACCCACCTTTAGGCTATACCTCTCCCTTCCTGTCAGCCAGGCTGGCCCAGCAACGGGAAGCTGAGA
GGCACCCACGTTTGGTGCCAACTGGCCCAACACACCGAGAGCCCTCACCAGTCCGTTACGACAATCTGTC
GCGCCACATTGTGGCCTCTCTCCAGGAACGAGAGAAGTTGCTGCGCCAGTCACCCCCACTCCCGGGCCGT
GAGGAAGAACCAGGCTTGGGGGACTCAGGCATTCAGTCAACACCAGGCTCGGGCCATGCCCCTCGTACTA
GTTCCTCCTCAGATGATTCAAAGAGATCACCTTTGGGCAAGACTCCACTGGGACGCCCAGCTGTCCCCCG
TTTTGGCAAGCCAGATGGGCTAAGGGGCCGGGGAGTAGGGTCCCCTGAACCAGGCCCAACAGCCCCATAC
CTGGGCCGATCGATGTCTTACAGCAGCCAAAAAGCCCAACCTGGTGTCTCTGAGACAGAAGAAGTGGCCT
TGCAGCCATTACTGACACCCAAAGATGAAGTACAGCTGAAGACCACCTACAGCAAATCCAACGGGCAGCC
CAAGAGCTTAGGCTCAGCCTCCCCTGGCCCAGGCCAGCCACCTCTCAGTAGCCCCACGAGGGGAGGAGTC
AAGAAGGTGTCAGGGGTTGGTGGTACCACCTATGAGATTTCGGTGTGA

Translation (715 aa):
MPAESGKRFKPSKYVPVSAAAIFLVGATTLFFAFTCPGLSLYVSPAVPIYNAIMFLFVLANFSMATFMDP
GIFPRAEEDEDKEDDFRAPLYKTVEIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNC
IGRRNYRYFFLFLLSLTAHIMGVFGFGLLYVLYHIEELSGVRTAVTMAVMCVAGLFFIPVAGLTGFHVVL
VARGRTTNEQVTGKFRGGVNPFTNGCCNNVSRVLCSSPAPRYLGRPKKEKTIVIRPPFLRPEVSDGQITV
KIMDNGIQGELRRTKSKGSLEITESQSADAEPPPPPKPDLSRYTGLRTHLGLATNEDSSLLAKDSPPTPT
MYKYRPGYSSSSTSAAMPHSSSAKLSRGDSLKEPTSIAESSRHPSYRSEPSLEPESFRSPTFGKSFHFDP
LSSGSRSSSLKSAQGTGFELGQLQSIRSEGTTSTSYKSLANQTRNGSLSYDSLLTPSDSPDFESVQAGPE
PDPPLGYTSPFLSARLAQQREAERHPRLVPTGPTHREPSPVRYDNLSRHIVASLQEREKLLRQSPPLPGR
EEEPGLGDSGIQSTPGSGHAPRTSSSSDDSKRSPLGKTPLGRPAVPRFGKPDGLRGRGVGSPEPGPTAPY
LGRSMSYSSQKAQPGVSETEEVALQPLLTPKDEVQLKTTYSKSNGQPKSLGSASPGPGQPPLSSPTRGGV
KKVSGVGGTTYEISV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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