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Report for CCDS8446.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8446.1 Public Homo sapiens 11 OR8B8 24 110 108 CCDS HistoryNCBI Gene:26493Re-query CCDS DB by CCDS ID:8446.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 8446.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328064.2 ENSP00000330280.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000328064.2Link to Ensembl Protein Viewer:ENSP00000330280.2Re-query CCDS DB by Nucleotide ID:ENST00000328064Re-query CCDS DB by Protein ID:ENSP00000330280
Original member Current member EBI ENST00000642064.1 ENSP00000493014.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000642064.1Link to Ensembl Protein Viewer:ENSP00000493014.1Re-query CCDS DB by Nucleotide ID:ENST00000642064Re-query CCDS DB by Protein ID:ENSP00000493014
Original member Current member NCBI NM_012378.2 NP_036510.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012378.2Link to Protein Sequence:NP_036510.1Re-query CCDS DB by Nucleotide ID:NM_012378Re-query CCDS DB by Protein ID:NP_036510Link to BLAST:NP_036510.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036510.1 311 Q15620 311 100% 0 0

Chromosomal Locations for CCDS 8446.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 124440150 124441085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGCTGCTGAGAATTCCTCCTTCGTGACACAGTTTATCCTCGCAGGCTTAACTGACCAACCGGGAGTCC
AGATCCCCCTCTTCTTCCTGTTTCTAGGCTTCTACGTGGTCACTGTGGTGGGGAACCTGGGCTTGATAAC
CCTGATAAGGCTCAACTCTCACTTGCACACCCCTATGTACTTCTTCCTCTATAACTTGTCCTTCATAGAT
TTCTGCTATTCCAGTGTTATCACTCCCAAAATGCTGATGAGCTTTGTCTTAAAGAAGAACAGCATCTCCT
ACGCAGGGTGTATGACTCAGCTCTTCTTCTTTCTTTTCTTTGTTGTCTCTGAGTCCTTCATCCTGTCAGC
AATGGCGTATGACCGCTATGTGGCCATCTGTAACCCACTGTTGTACATGGTCACCATGTCTCCCCAGGTG
TGTTTTCTCCTTTTGTTGGGTGTCTATGGGATGGGGTTTGCTGGGGCCATGGCCCACACAGCGTGCATGA
TGGGTGTGACCTTCTGTGCCAATAACCTTGTCAACCACTACATGTGTGACATCCTTCCCCTTCTTGAGTG
TGCTTGCACCAGCACCTATGTGAATGAGCTTGTAGTGTTTGTTGTTGTGGGCATTGATATTGGTGTGCCC
ACAGTCACCATCTTCATTTCCTATGCTCTCATTCTCTCCAGCATCTTCCACATTGATTCCACGGAGGGCA
GGTCCAAAGCCTTCAGCACCTGCAGCTCCCACATAATTGCAGTTTCTCTGTTCTTTGGGTCAGGAGCATT
CATGTACCTCAAACCCTTTTCTCTTTTAGCTATGAACCAGGGCAAGGTGTCTTCCCTATTCTATACCACT
GTGGTGCCCATGCTCAACCCATTAATTTATAGCCTGAGGAATAAGGACGTCAAAGTTGCTCTAAAGAAAA
TCTTGAACAAAAATGCATTCTCCTGA

Translation (311 aa):
MAAENSSFVTQFILAGLTDQPGVQIPLFFLFLGFYVVTVVGNLGLITLIRLNSHLHTPMYFFLYNLSFID
FCYSSVITPKMLMSFVLKKNSISYAGCMTQLFFFLFFVVSESFILSAMAYDRYVAICNPLLYMVTMSPQV
CFLLLLGVYGMGFAGAMAHTACMMGVTFCANNLVNHYMCDILPLLECACTSTYVNELVVFVVVGIDIGVP
TVTIFISYALILSSIFHIDSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPFSLLAMNQGKVSSLFYTT
VVPMLNPLIYSLRNKDVKVALKKILNKNAFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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