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Report for CCDS9782.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9782.1 Public Homo sapiens 14 PLEK2 24 110 108 CCDS HistoryNCBI Gene:26499Re-query CCDS DB by CCDS ID:9782.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9782.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216446.9 ENSP00000216446.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216446.9Link to Ensembl Protein Viewer:ENSP00000216446.4Re-query CCDS DB by Nucleotide ID:ENST00000216446Re-query CCDS DB by Protein ID:ENSP00000216446
Original member Current member NCBI NM_016445.3 NP_057529.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016445.3Link to Protein Sequence:NP_057529.1Re-query CCDS DB by Nucleotide ID:NM_016445Re-query CCDS DB by Protein ID:NP_057529Link to BLAST:NP_057529.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057529.1 353 Q9NYT0 353 100% 0 0

Chromosomal Locations for CCDS 9782.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 67387329 67387456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67388224 67388302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67390663 67390746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67392326 67392427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67392662 67392849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67393150 67393241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67395402 67395583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67397662 67397826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 67412018 67412059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1062 nt):
ATGGAGGACGGCGTGCTCAAGGAGGGCTTCCTGGTCAAGAGGGGCCACATTGTCCACAACTGGAAGGCGC
GATGGTTCATCCTTCGGCAGAACACGCTGGTGTACTACAAGCTTGAGGGGGGTCGGAGAGTGACCCCTCC
CAAGGGCCGGATCCTCCTGGATGGCTGCACCATCACCTGCCCCTGCCTGGAGTATGAAAACCGACCGCTC
CTCATTAAGCTGAAGACTCAAACATCCACGGAGTACTTCCTGGAGGCCTGTTCTCGAGAGGAGCGGGATG
CCTGGGCCTTTGAGATCACCGGGGCTATTCATGCAGGGCAGCCGGGGAAGGTCCAGCAGCTGCACAGCCT
GAGAAACTCCTTCAAGCTGCCCCCGCACATCAGCCTGCATCGCATTGTGGACAAGATGCACGATAGCAAC
ACCGGAATCCGTTCAAGCCCCAACATGGAGCAGGGAAGCACCTATAAAAAGACCTTCCTCGGCTCCTCCC
TGGTGGACTGGCTCATCTCCAACAGCTTCACGGCCAGCCGTCTGGAGGCGGTGACCCTGGCCTCCATGCT
CATGGAGGAGAACTTCCTCAGGCCTGTGGGTGTCCGAAGCATGGGAGCCATTCGCTCTGGGGATCTGGCC
GAGCAGTTCCTGGATGACTCCACAGCCCTGTACACTTTTGCTGAGAGCTACAAAAAGAAGATAAGCCCCA
AGGAAGAAATTAGCCTGAGCACTGTGGAGTTAAGTGGCACGGTGGTGAAACAAGGCTACCTGGCCAAGCA
GGGACACAAGAGGAAAAACTGGAAGGTGCGTCGCTTTGTTCTAAGGAAGGATCCAGCTTTCCTGCATTAC
TATGACCCTTCCAAAGAAGAGAACAGGCCAGTGGGTGGGTTTTCTCTTCGTGGTTCACTCGTGTCTGCTC
TGGAAGATAATGGCGTTCCCACTGGGGTTAAAGGGAATGTCCAGGGAAACCTCTTCAAAGTGATTACTAA
GGATGACACACACTATTACATTCAGGCCAGCAGCAAGGCTGAGCGAGCCGAGTGGATTGAAGCTATCAAA
AAGCTAACATGA

Translation (353 aa):
MEDGVLKEGFLVKRGHIVHNWKARWFILRQNTLVYYKLEGGRRVTPPKGRILLDGCTITCPCLEYENRPL
LIKLKTQTSTEYFLEACSREERDAWAFEITGAIHAGQPGKVQQLHSLRNSFKLPPHISLHRIVDKMHDSN
TGIRSSPNMEQGSTYKKTFLGSSLVDWLISNSFTASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDLA
EQFLDDSTALYTFAESYKKKISPKEEISLSTVELSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHY
YDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIK
KLT


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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