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Report for CCDS12334.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12334.1 Public Homo sapiens 19 OR10H3 24 110 108 CCDS HistoryNCBI Gene:26532Re-query CCDS DB by CCDS ID:12334.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 12334.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641646.1 ENSP00000493287.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641646.1Link to Ensembl Protein Viewer:ENSP00000493287.1Re-query CCDS DB by Nucleotide ID:ENST00000641646Re-query CCDS DB by Protein ID:ENSP00000493287
Original member Current member NCBI NM_013938.2 NP_039226.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013938.2Link to Protein Sequence:NP_039226.1Re-query CCDS DB by Nucleotide ID:NM_013938Re-query CCDS DB by Protein ID:NP_039226Link to BLAST:NP_039226.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_039226.1 316 O60404 316 100% 0 0

Chromosomal Locations for CCDS 12334.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 15741393 15742343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGCCTGGTCAGAACTACAGAACCATATCTGAATTTATCCTCTCTGGCTTCTCAGCCTTCCCCCAGCAGC
TCCTGCCTGTCTTGTTCCTGCTGTACCTCCTGATGTTCCTGTTCACATTGCTTGGCAACCTTCTTATCAT
GGCCACAGTTTGGATTGAACGCAGACTCCACACACCCATGTACCTCTTCTTGTGTGCCCTCTCCATCTCT
GAGATTCTGTTCACTGTTGCCATCACCCCTCGCATGCTGGCTGATCTGCTCTTCACCCATCGTTCCATCA
CCTTTGTGGCTTGTGCCATTCAGATGTTCTTCTCCTTCATGTTTGGCTTCACTCACTCCTTCCTTCTCAT
GGTCATGGGCTATGATCACTACGTGACCATCTGCCACCCACTGCATTACAACATGCTAATGAGTCCCCGT
GGCTGTGCCCATCTTGTGGCCTGGACCTGGGCTGGTGGCTCGGTCATGGGGATGATGGTGACAATGATGG
TTTTTCACCTCACTTTCTGTGGGTCTAATGTGATCCACCATTTTCTCTGTCATGTGCTTTCCCTCTTGAA
GTTGGCCTGTGGGAGCAAGACATCATCTGTCATCATGGGTGTGATGCTGGTGTGTGTCACAGCCCTGATA
GGCTGTTTGTTCCTCATCATCCTCTCCTTTGTCTTCATTGTGGCTGCCATCTTGAGGATTCCTTCTGCTG
AGGGCCGGCACAAGACTTTCTCCACTTGTGTATCCCACCTCACTGTGGTGGTCATGCACTATAGTTTTGC
CTCCCTTATCTACCTCAAACCCAAGGGCCTCCATTCTATGTACAGTGATGCCTTGATGGCCACCACCTAT
ACTGTCTTCACCCCCTTCCTCAGCCCAATCATTTTCAGTCTAAGGAACAAGGAGCTGAAGAATGCCATAA
ATAAAAACTTTTGCAGAAGGTTCTGCCCTCTAAGCTCCTAA

Translation (316 aa):
MPGQNYRTISEFILSGFSAFPQQLLPVLFLLYLLMFLFTLLGNLLIMATVWIERRLHTPMYLFLCALSIS
EILFTVAITPRMLADLLFTHRSITFVACAIQMFFSFMFGFTHSFLLMVMGYDHYVTICHPLHYNMLMSPR
GCAHLVAWTWAGGSVMGMMVTMMVFHLTFCGSNVIHHFLCHVLSLLKLACGSKTSSVIMGVMLVCVTALI
GCLFLIILSFVFIVAAILRIPSAEGRHKTFSTCVSHLTVVVMHYSFASLIYLKPKGLHSMYSDALMATTY
TVFTPFLSPIIFSLRNKELKNAINKNFCRRFCPLSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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