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Report for CCDS12320.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12320.1 Public Homo sapiens 19 OR7C2 24 110 108 CCDS HistoryNCBI Gene:26658Re-query CCDS DB by CCDS ID:12320.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 12320.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000248072.3 ENSP00000248072.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000248072.3Link to Ensembl Protein Viewer:ENSP00000248072.3Re-query CCDS DB by Nucleotide ID:ENST00000248072Re-query CCDS DB by Protein ID:ENSP00000248072
Original member Current member NCBI NM_012377.1 NP_036509.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012377.1Link to Protein Sequence:NP_036509.1Re-query CCDS DB by Nucleotide ID:NM_012377Re-query CCDS DB by Protein ID:NP_036509Link to BLAST:NP_036509.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036509.1 319 O60412 319 100% 0 0

Chromosomal Locations for CCDS 12320.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 14941489 14942448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGGAAAGAGGAAACCAAACAGAAGTTGGAAACTTTCTCCTCCTGGGATTCGCAGAGGACTCTGACATGC
AGCTTCTCCTCCATGGGCTGTTCCTCTCCATGTACCTGGTTACCATCATCGGAAACCTGCTCATCATCCT
GACCATCAGTTCAGACTCCCACCTCCACACCCCCATGTACTTCTTCCTCTCCAACCTGTCCTTTGCTGAC
ATCTGTTTCACATCCACGACTGTCCCAAAGATGCTGGTGAATATCCAAACACAAAGCAAAATGATCACTT
TTGCAGGCTGCCTCACTCAGATATTTTTTTTCATTGCATTTGGATGCCTGGACAATTTGCTCCTGACCAT
GACGGCCTATGACCGCTTCGTGGCCATCTGTTACCCCCTGCACTACACGGTCATCATGAACCCCCGGCTC
TGTGGACTGCTGGTTCTGGGGTCCTGGTGCATCAGTGTCATGGGTTCCTTGCTTGAGACCTTGACCATTT
TGAGGCTGTCCTTCTGCACAAATATGGAAATTCCGCACTTTTTTTGTGATCCTTCCGAAGTCCTGAAGCT
GGCCTGTTCTGACACCTTCATCAATAACATCGTGATGTATTTTGTGACCATTGTCCTGGGTGTTTTTCCT
CTCTGTGGAATCCTATTCTCTTATTCTCAGATTTTCTCCTCCGTCCTAAGAGTATCTGCCAGAGGCCAGC
ACAAAGCCTTTTCCACCTGTGGTTCCCACCTCTCAGTGGTCAGCTTGTTCTATGGCACTGGCCTTGGGGT
CTATCTCAGTTCTGCAGTTACACCACCTTCTAGGACAAGTCTGGCAGCCTCGGTGATGTACACCATGGTC
ACCCCCATGCTGAACCCCTTCATCTACAGCCTGAGGAACAAGGACATGAAGGGGTCACTGGGGAGACTCC
TCCTCAGGGCAACGTCTCTCAAAGAGGGGACCATTGCTAAGCTCTCATGA

Translation (319 aa):
MERGNQTEVGNFLLLGFAEDSDMQLLLHGLFLSMYLVTIIGNLLIILTISSDSHLHTPMYFFLSNLSFAD
ICFTSTTVPKMLVNIQTQSKMITFAGCLTQIFFFIAFGCLDNLLLTMTAYDRFVAICYPLHYTVIMNPRL
CGLLVLGSWCISVMGSLLETLTILRLSFCTNMEIPHFFCDPSEVLKLACSDTFINNIVMYFVTIVLGVFP
LCGILFSYSQIFSSVLRVSARGQHKAFSTCGSHLSVVSLFYGTGLGVYLSSAVTPPSRTSLAASVMYTMV
TPMLNPFIYSLRNKDMKGSLGRLLLRATSLKEGTIAKLS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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