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Report for CCDS37824.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37824.1 Public Mus musculus 18 Zfp608 23 108 98 CCDS HistoryNCBI Gene:269023Re-query CCDS DB by CCDS ID:37824.1See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37824.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000064763.6 ENSMUSP00000068192.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000064763.6Link to Ensembl Protein Viewer:ENSMUSP00000068192.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000064763Re-query CCDS DB by Protein ID:ENSMUSP00000068192
Original member Current member NCBI NM_175751.4 NP_786927.2 Accepted alive Link to Nucleotide Sequence:NM_175751.4Link to Protein Sequence:NP_786927.2Re-query CCDS DB by Nucleotide ID:NM_175751Re-query CCDS DB by Protein ID:NP_786927Link to BLAST:NP_786927.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_786927.2 1511 Q56A10-1 1511 100% 0 0

Chromosomal Locations for CCDS 37824.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 54889075 54889081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54889814 54889895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54891750 54891903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54894451 54894623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54895220 54895637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54897165 54899619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54900213 54900300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54946553 54946808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54987611 54988513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4536 nt):
ATGTCCGTGAACGTTTCGACTGCAGGAAAAGGTGTGGATCCAAATACAGTTGATACTTATGACAGTGGCG
ATGATTGGGAAATCGGGGTTGGAAATTTAATCATTGATTTGGACGCCGATTTGGAAAAGGACAGACAAAA
ATTTGAGATGAATAATTCCACCAACACCACTACCAACACCACTAAGGATTGTGGAGGTCCGGCCTCCAAT
GGGACCTGTTCTACCTCAGCCTTAGCTGATGGCCTAAAATTTGCTTCTGTTCAGCCCTCCGCTCCCCAGG
GGAATTCACACAAAGAAACCAGCAAATCAAAAGTGAAAAGGGCTAAAACTTCTAAGGATGCTAATAAATC
TCTGCCTTCTGCTGCCTTGTATGGAATTCCCGAGATCAGCAGCACTGGCAAGAGGCAGGAAGTCCAAGGG
CGCCCTGGAGAGGCTACTGGCATGAATTCAGCGCTGGGTCAAAGTGTGAGCGGCGGCGGCAGCAGCAACC
CAAACAGCAACGGTACCAGCACCGGGACCTCGGCTGCCACCGCGGGGGCAGGCTCCTGTGGGAAAAGCAA
GGAAGAGAAGCCAGGGAAAAGCCACAGCAGCCGAGGCGCCAAGCGGGATAAGGATGCTGCGAGATCCCGG
AAAGAGAAACACGACCTGCTGCAGGGCCACCAGAATGGCGGCGGAGGCCAGGCCCCCTCCGGTGGTCACC
TCTATGGCTTTGGGACCAAGAGCAATGGAAGTGGCGCGAGCCCCTTTCACTGTGGGGGCGCTGGGAGTGG
CAGCGTTGGGGCTGCAGGGGAAGTTAGCAAAACTGCTCCGGATTCAACGCTCATGGGAAACTCTATGCTG
GTCAAGAAGGAAGAGGAGGAGGAGGAGAGCCACAGGCGAATCAAGAAACTGAAAACTGAGAAGGTTGACC
CCCTGTTTACAGTGCCGGCACCACCGCCGCCGATTGCCAGCAGTCTCGCACCTCAGATTCCGCCCTCCTA
CTTTCCCCCATCTTCATCCAATATTGCAGCACCAGTCGAACAGCTTTTGGTTCGGACTCGGTCCGTGGGT
GTCAATACGTGTGAAGTTGGAGTAGTGACAGAGCCAGAGTGTCTTGGGCCCTGTGAACCTGGGACCAGTG
TCAATTTGGAAGGGATCGTGTGGCATGAAACAGAAGAAGGTGTCCTAGTGGTCAATGTCACATGGAGGAA
CAAAACCTACGTGGGGACCCTCCTAGACTGCACCAAGCACGACTGGGCCCCTCCCCGGTTTTGCGAATCA
CCGACAAGTGACCTGGAAATGCGAGGGGGCCGGGGCAGAGGGAAGAGAGCGAGGTCTGCCGCGGCTGCCC
CAGGCTCCGAGGTCAGCTTCACCGAGTCCAGAGGGCTGCAGAGCAAGAACAGAGGGGGAGCCAATGGGAA
AGGGAGGCGTGGCAGCCTCAACGCCAGCGGACGAAGGACACCCCCAAACTGTGCTGCAGAGGACATAAAA
GCCAGCCCTTCCTCAACCAACAAAAGGAAGAACAAGCCCCCAATGGAGTTGGATCTGAACTCGAGCTCTG
AGGACAGTAAGCCCGGGAAGCGAGTGCGCACGAATTCCAGAAGCACGCCTACCACTCCTCAGGGGAAGCC
AGAGACTACTTTTTTGGACCAAGGCTGCTCCTCTCCAGTGTTAATTGATTGTCCCCACCCAAACTGCAAC
AAAAAATATAAGCACATAAACGGCCTGAGGTACCACCAGGCACATGCGCACTTAGACCCGGAAAACAAAC
TAGAGTTCGAGCCGGATAGCGAGGACAAGATCTCAGACTGTGAGGAAGCCTTGAGCAACGTGGCCCTCGA
ATGCAACGAGTCAAGCACAAGTGTGTCATCATACGATCAGACGAAAGCACCTGGGTCCCCCGGGGCTGGG
AACCCCCCTGGGACACCCAAGGGAAAGAGAGAGCACGTGAGCAATGGCCCAGGTCCTATTATAGGTTCGA
AAACTGGCAAGAATTCTGGCAAGAAGAGGGGCCTTAACAACGAACTGAACAACCTTCCGGTCATCTCCAA
CATGACGGCCGCTTTAGACATTTGTTCAGCCACAGACAGCAATCTAACGGCGGAAATGCCCAAATTGGAA
GCGGAAGGACTGATTGACAAGAAAAGTTTGGGGGATAAAGAAAAGGGCAAAAAAGCAAACAATTGCAAAA
TGGACAAAAACCTCTCCAAACTGAAAAGCGCCCGCCCCATTGCCCCCGCCCCTGCCCCTACGCCCCCACA
GCTGATTGCTATACCGACTGCAGCCTTCACATCCACCACCACAGGGACCATACCTGGACTGCCCTCCCTC
ACGACCACTGTGGTCCAGGCTACACCAAAGAGCCCTCCATTGAAACCTATTCAACCAAAGCCCACAATTA
TGGGGGAGCCCATCACCGTGAACCCAGCTCTGGTGTCACTCAAAGACAGAAAGAAAAAGGAGAAGCGAAA
GCTCAAGGACAAAGAAGGGAAAGAGACTGGAGGTCCCAAAATGGATGCTAAGCTGGGGAAGCTGGAGGAA
GCCAAGGCGGCTAGCAAGGATTTGTCTGGGCATTTTTTAAAGGACCATCTCGGTAAGAGCGAAGGGCTGG
CTAATGGATTGTCAGAGTCTCAGGAGAGCCGCATGGCCAGCATCAAAGCCGAGGCCGATAAGGTTTACAC
ATTCACGGACAATGCCCCCAGCCCTTCCATCGGGAGTGCCTCACGCATGGAATGCAGTACCTTGGTGAAT
GGGCAAGCACCCATGGCACCACTGCATGTATTGACCCAGAATGGGGCTGAGAGCGCAGCAGCTAAGACCA
GCAGTCCAGCCTATTCGGACATATCAGATGCTGCAGATGATGGCGGTTCTGACAGCAGGTCAGAGGGCAT
GAGGTCAAAGGCCAGTTCCCCATCGGATACCTTTTCTAACAAAGACGGTGTTGTGAAAGGGCATCCTTCA
ACTTCAGCACAGCCATCTCAGCTGAAAGAGTCCCATTCTCCCTATTACCATGGCTATGAGCCTTACTATT
CTCCGAGTTACATGCACCCTGGACAGGTTGGTGCCCCGGCAGCTGGGAATGGTGGGAGCACACAGGGCAT
GAAGATCAAGAAGGAGTCAGAGGAAGATGCGGAGAAGAAAGACAAGGCGGAACAGTTGGAGTCCAAGAAA
GTAGACCATACTTCTGCACCCCTGCAGCCTCAGCACCAGTCAGTCATCACCCAGAGACACCCTGCCCTGG
CTCAGTCACTTTATTACGGCCAGTATGCCTACGGGCTCTATATGGACCAGAAATCTCTGATGGCTACCAG
CCCTGCCTACAGACAGCAGTATGAGAAGTACTATGAGGACCAGAGACTGGCAGAGCAGAAAATGGCCCAG
AGTGGGAGAGGAGACTGTGAAAGAAAGGCTGAACTCCCCTTGAAAGAACTGGGCAAGGAAGACAATAAGC
AGAAAAACATGCCATCAGCCACTATCTCAAAAGCTCCCTCTACCCCGGAGCCTAACAAAAACCATTCTAA
ACTAGGGCCATCAGTGCCTAATAAAACTGAGGAGACAGGTAAATCACAGCTTCTCTCCAGTCACCAGCAG
CAGCTTCAGGCCGACAGCTTCAAAGCTAAGCAGATGGAAAACCACCAGCTTATTAAGGAGGCTGTAGAAA
TGAAGTCTGTCATGGACTCTATGAAGCAGACAGGTGTAGACCCAACCTCGAGATTTAAACAAGATCCAGA
GTCAAGGACATGGCACCATTATGTATACCAGCCCAAGTACCTGGACCAACAAAAGCCAGAAGAACTTGAC
AGAGAAAAGAAATTGAAAGAGGACAGTCCAAGGAAGACTCCTAACAAAGAGAGTGGCGTGTCCAGTCTCC
CCGTGTCATTAACAAACATCAAAGAGGAGCCCAAAGAGGGCAAGCGTCCTGATTCCCAGTCGGTGGAGGA
GAACAAGCTAAAGAATGATGATCGGAAGACACCGGTGAACTGGAAGGACTCTCGGGGGACACGAGTGGCC
GTGTCCTCACCCATGAGTCAGCACCAGTCCTACATACAATACTTGCATGCTTATCCTTACCCACAGATGT
ATGACCCCAGCCACCCTGCATACCGGGCTGTCTCTCCTGTCTTAATGCACAGTTACCCTGGGGCCTATCT
CTCTCCAGGATTTCATTATCCTGTTTATGGAAAGATGTCTGGGAGAGAAGAGGCAGAGAAAGTCAATACT
AGTCCCAGCATCAACACAAAAACAGCCAGCGAAGCCAAAGCCCTGGACCTACTCCAACATCACGCCAACC
AATACCGCAGCAAGTCCCCTGCTCCTGTGGAGAAGGCTTCCACGGAGCGAGAACGGGAAGCAGAGCGGGA
ACGGGATCGCCACTCCCCCTTCAGCCAGCGGCACCTGCACACACACCACCACACCCATGTTGGCATGGGC
TACCCTCTCATCCCTGGTCAATACGACCCTTTTCAAGGCTTGACCTCTGCTGCCCTAGTTGCCTCTCAGC
AGGTGGCTGCCCAGGCATCTGCTTCTGGAATGTTTCCTGCACAGAGAAGAGAATAA

Translation (1511 aa):
MSVNVSTAGKGVDPNTVDTYDSGDDWEIGVGNLIIDLDADLEKDRQKFEMNNSTNTTTNTTKDCGGPASN
GTCSTSALADGLKFASVQPSAPQGNSHKETSKSKVKRAKTSKDANKSLPSAALYGIPEISSTGKRQEVQG
RPGEATGMNSALGQSVSGGGSSNPNSNGTSTGTSAATAGAGSCGKSKEEKPGKSHSSRGAKRDKDAARSR
KEKHDLLQGHQNGGGGQAPSGGHLYGFGTKSNGSGASPFHCGGAGSGSVGAAGEVSKTAPDSTLMGNSML
VKKEEEEEESHRRIKKLKTEKVDPLFTVPAPPPPIASSLAPQIPPSYFPPSSSNIAAPVEQLLVRTRSVG
VNTCEVGVVTEPECLGPCEPGTSVNLEGIVWHETEEGVLVVNVTWRNKTYVGTLLDCTKHDWAPPRFCES
PTSDLEMRGGRGRGKRARSAAAAPGSEVSFTESRGLQSKNRGGANGKGRRGSLNASGRRTPPNCAAEDIK
ASPSSTNKRKNKPPMELDLNSSSEDSKPGKRVRTNSRSTPTTPQGKPETTFLDQGCSSPVLIDCPHPNCN
KKYKHINGLRYHQAHAHLDPENKLEFEPDSEDKISDCEEALSNVALECNESSTSVSSYDQTKAPGSPGAG
NPPGTPKGKREHVSNGPGPIIGSKTGKNSGKKRGLNNELNNLPVISNMTAALDICSATDSNLTAEMPKLE
AEGLIDKKSLGDKEKGKKANNCKMDKNLSKLKSARPIAPAPAPTPPQLIAIPTAAFTSTTTGTIPGLPSL
TTTVVQATPKSPPLKPIQPKPTIMGEPITVNPALVSLKDRKKKEKRKLKDKEGKETGGPKMDAKLGKLEE
AKAASKDLSGHFLKDHLGKSEGLANGLSESQESRMASIKAEADKVYTFTDNAPSPSIGSASRMECSTLVN
GQAPMAPLHVLTQNGAESAAAKTSSPAYSDISDAADDGGSDSRSEGMRSKASSPSDTFSNKDGVVKGHPS
TSAQPSQLKESHSPYYHGYEPYYSPSYMHPGQVGAPAAGNGGSTQGMKIKKESEEDAEKKDKAEQLESKK
VDHTSAPLQPQHQSVITQRHPALAQSLYYGQYAYGLYMDQKSLMATSPAYRQQYEKYYEDQRLAEQKMAQ
SGRGDCERKAELPLKELGKEDNKQKNMPSATISKAPSTPEPNKNHSKLGPSVPNKTEETGKSQLLSSHQQ
QLQADSFKAKQMENHQLIKEAVEMKSVMDSMKQTGVDPTSRFKQDPESRTWHHYVYQPKYLDQQKPEELD
REKKLKEDSPRKTPNKESGVSSLPVSLTNIKEEPKEGKRPDSQSVEENKLKNDDRKTPVNWKDSRGTRVA
VSSPMSQHQSYIQYLHAYPYPQMYDPSHPAYRAVSPVLMHSYPGAYLSPGFHYPVYGKMSGREEAEKVNT
SPSINTKTASEAKALDLLQHHANQYRSKSPAPVEKASTEREREAERERDRHSPFSQRHLHTHHHTHVGMG
YPLIPGQYDPFQGLTSAALVASQQVAAQASASGMFPAQRRE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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