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Report for CCDS2433.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2433.1 Public Homo sapiens 2 CNPPD1 24 110 108 CCDS HistoryNCBI Gene:27013Re-query CCDS DB by CCDS ID:2433.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2433.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360507.10 ENSP00000353698.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360507.10Link to Ensembl Protein Viewer:ENSP00000353698.5Re-query CCDS DB by Nucleotide ID:ENST00000360507Re-query CCDS DB by Protein ID:ENSP00000353698
Original member Current member EBI ENST00000409789.5 ENSP00000386277.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409789.5Link to Ensembl Protein Viewer:ENSP00000386277.1Re-query CCDS DB by Nucleotide ID:ENST00000409789Re-query CCDS DB by Protein ID:ENSP00000386277
Original member Current member NCBI NM_001321389.2 NP_001308318.2 Accepted alive Link to Nucleotide Sequence:NM_001321389.2Link to Protein Sequence:NP_001308318.2Re-query CCDS DB by Nucleotide ID:NM_001321389Re-query CCDS DB by Protein ID:NP_001308318Link to BLAST:NP_001308318.2
Original member Current member NCBI NM_001321390.2 NP_001308319.2 Accepted alive Link to Nucleotide Sequence:NM_001321390.2Link to Protein Sequence:NP_001308319.2Re-query CCDS DB by Nucleotide ID:NM_001321390Re-query CCDS DB by Protein ID:NP_001308319Link to BLAST:NP_001308319.2
Original member Current member NCBI NM_001321391.2 NP_001308320.2 Accepted alive Link to Nucleotide Sequence:NM_001321391.2Link to Protein Sequence:NP_001308320.2Re-query CCDS DB by Nucleotide ID:NM_001321391Re-query CCDS DB by Protein ID:NP_001308320Link to BLAST:NP_001308320.2
Original member Current member NCBI NM_015680.6 NP_056495.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015680.6Link to Protein Sequence:NP_056495.4Re-query CCDS DB by Nucleotide ID:NM_015680Re-query CCDS DB by Protein ID:NP_056495Link to BLAST:NP_056495.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308318.2 410 Q9BV87 410 100% 0 0
NP_001308319.2 410 Q9BV87 410 100% 0 0
NP_001308320.2 410 Q9BV87 410 100% 0 0
NP_056495.4 410 Q9BV87 410 100% 0 0

Chromosomal Locations for CCDS 2433.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 219172586 219173128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219173350 219173467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219174146 219174207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219174778 219174906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219174988 219175108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219175591 219175672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219176223 219176331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219176760 219176828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1233 nt):
ATGGACCTGACCGGGCTCCTGCTGGACGAAGAAGGCACCTTCTCCCTCGCCGGCTTCCAGGACTTCACGT
TCCTCCCAGGACACCAGAAGCTGAGTGCCCGGATCCGAAGGAGGCTCTACTATGGCTGGGACTGGGAAGC
CGACTGTAGCCTGGAGGAGCTCTCCAGCCCGGTGGCAGACATTGCTGTCGAACTGCTCCAGAAGGCAGCC
CCCAGCCCTATTCGCCGACTCCAGAAGAAATATGTAGCTCATGTGTCCCGGGAGGCATGCATCTCCCCAT
GTGCTATGATGCTGGCTCTGGTGTACATTGAACGGCTCCGGCACCGAAACCCAGACTACTTGCAGCATGT
GTCATCCTCTGACTTGTTCCTGATCTCCATGATGGTGGCCAGTAAGTACCTCTATGATGAAGGGGAGGAG
GAGGAGGTCTTCAACGACGAATGGGGAGCTGCTGGGGGTGTGGCCGTGCCCACTCTCAATGCCTTGGAGA
GGGGCTTCCTGAGTGCCATGGATTGGCATCTCTACACTGACCCTCGGGAGATCTTTGAGGTGCTGAGCTG
GTTGGAGAGCTGTGTGGCTGAGCAGCAGGGACGGTGGCGAGGCTGGTACACCTACACAGACCTGTGTGTG
CTGCTGGAGCAGCCGACCTGGCAGTTGGCCCTGGGCTCCCTCTGCCAGCGGCTGGTAAAGCTGTCTTGCC
TGTTAGCTGTGGCATATGTGAGCAGTGTGGCCCTGGCTGTGGCATCGGTGGCCGTAATACATCAGTCTTT
GGGGCTGTCCTGCATCCCTACACCTGGGCCGCCTGACCTTGGACTGACCTCCCGTTGCCTCCTGGAGCCC
TGCATACCTTCTGTGCCACAATGCCTGCCGTCTCTCGCTAATGTCTCCAGCTGCCTGGAAGGCAGCATGG
GGCTGCGGTCACTCTGGGGCAGTCTTCTGGCCTCACTGACTCCTCCACCATTGCCTCCCCCAGACCCCCC
TGCCCCTCCCACTCTTCTTCATAACTGCCACCTTTGCCAGAAGCTCCAGAGAGACTCCCCAACCTGCCAT
GCCTGCCTCCACCCCAACCGTACAGTCCCCACTGCGCTGTCCAGCCCCTGGTACCATACCTATGGCCTGG
CTCCCCCCTGGCCTTGGAGCCCGGTGCTCCTTTCACTTCCTCAGCCTCAGCAATGTTCCCTTTTCAGTGT
CATGGAGCTGGCTCGCCTCAAGTCTTTCGTTTTCCCAGGCTAG

Translation (410 aa):
MDLTGLLLDEEGTFSLAGFQDFTFLPGHQKLSARIRRRLYYGWDWEADCSLEELSSPVADIAVELLQKAA
PSPIRRLQKKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEE
EEVFNDEWGAAGGVAVPTLNALERGFLSAMDWHLYTDPREIFEVLSWLESCVAEQQGRWRGWYTYTDLCV
LLEQPTWQLALGSLCQRLVKLSCLLAVAYVSSVALAVASVAVIHQSLGLSCIPTPGPPDLGLTSRCLLEP
CIPSVPQCLPSLANVSSCLEGSMGLRSLWGSLLASLTPPPLPPPDPPAPPTLLHNCHLCQKLQRDSPTCH
ACLHPNRTVPTALSSPWYHTYGLAPPWPWSPVLLSLPQPQQCSLFSVMELARLKSFVFPG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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