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Report for CCDS19637.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19637.1 Public Mus musculus 5 Adam1a 23 108 98 CCDS HistoryNCBI Gene:280668Re-query CCDS DB by CCDS ID:19637.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 19637.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100757.5 ENSMUSP00000098320.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100757.5Link to Ensembl Protein Viewer:ENSMUSP00000098320.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000100757Re-query CCDS DB by Protein ID:ENSMUSP00000098320
Original member Current member NCBI NM_172126.2 NP_742124.2 Accepted alive Link to Nucleotide Sequence:NM_172126.2Link to Protein Sequence:NP_742124.2Re-query CCDS DB by Nucleotide ID:NM_172126Re-query CCDS DB by Protein ID:NP_742124Link to BLAST:NP_742124.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_742124.2 791 Q60813 791 100% 0 0

Chromosomal Locations for CCDS 19637.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 121518853 121521228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2376 nt):
ATGTCAGTGGCAGCAGCGGGGAGAGGGTTTGCCTCCAGTCTGTCTTCCCCACAGATCAGGCGAATAGCCT
TAAAAGAAGCTAAGCTAACACCTCACATCTGGGCGGCACTGCACTGGAACTTGGGACTGAGACTAGTGCC
ATCTGTCAGAGTAGGGATTTTGGTGCTACTGATTTTTCTCCCGAGCACGTTCTGTGACATTGGATCTGTA
TATAATTCTTCCTATGAAACTGTCATCCCTGAGAGACTGCCAGGCAAGGGGGGGAAAGACCCTGGAGGGA
AGGTGTCCTACATGCTATTGATGCAAGGCCAAAAGCAGCTGCTTCACCTCGAGGTAAAGGGACACTACCC
TGAGAATAACTTCCCAGTCTACAGTTACCACAATGGCATCCTGAGGCAAGAAATGCCTCTCCTCTCCCAG
GACTGCCACTATGAAGGCTACATGGAAGGGGTGCCAGGCTCCTTTGTTTCTGTCAACATCTGTTCAGGCC
TCAGGGGGGTCTTGATTAAAGAGGAAACATCCTATGGCATTGAGCCCATGCTCTCTTCCAAAAACTTTGA
ACATGTCCTCTACACCATGGAGCATCAGCCTGTGGTCTCCTGCAGTGTCACTCCCAAAGACAGCCCTGGG
GACACCAGCCATCCACCAAGGAGCAGGAAGCCCGATGACCTACTGGTTCTGACTGACTGGTGGTCACACA
CCAAGTATGTGGAGATGTTTGTGGTGGTCAACCACCAGCGGTTCCAGATGTGGGGCAGTAACATCAACGA
GACGGTCCAGGCAGTAATGGACATCATTGCTCTGGCCAACAGCTTCACTAGGGGGATAAACACAGAGGTG
GTGCTGGTGGGCCTGGAAATCTGGACAGAGGGGGACCCGATAGAGGTCCCAGTGGACCTGCAGACCACAC
TCAGGAATTTCAACTTCTGGAGACAGGAGAAACTCGTGGGCCGGGTCAGGCACGATGTGGCACACTTGAT
CGTCGGGCATCGCCCAGGAGAGAACGAGGGCCAGGCGTTTCTCCGTGGTGCCTGTTCGGGTGAGTTTGCG
GCGGCCGTGGAGGCCTTCCATCATGAAGATGTCCTCCTGTTCGCGGCTCTCATGGCCCACGAGCTCGGGC
ACAACCTGGGTATCCAGCACGACCACCCGACCTGCACCTGTGGTCCCAAGCACTTCTGCCTCATGGGTGA
GAAGATCGGTAAGGACAGTGGCTTCAGCAACTGCAGCTCTGACCACTTCCTCCGTTTCCTCCATGACCAC
AGAGGGGCGTGCCTGCTTGATGAGCCTGGGCGCCAGAGCCGCATGCGCAGAGCTGCCAATTGTGGGAATG
GTGTGGTGGAGGACTTGGAGGAGTGTGACTGCGGCAGTGACTGTGACAGTCACCCGTGCTGTTCGCCAAC
ATGTACGCTTAAGGAGGGTGCGCAGTGCAGTGAGGGACTCTGCTGCTACAACTGTACATTCAAGAAGAAA
GGGAGCTTATGCCGTCCTGCTGAGGATGTGTGTGACCTTCCCGAGTATTGTGACGGCAGTACTCAGGAAT
GCCCTGCAAACAGCTACATGCAGGATGGCACACAGTGTGATAGGATTTATTACTGCTTGGGGGGTTGGTG
TAAGAACCCTGATAAACAATGTTCAAGGATCTATGGGTATCCTGCAAGATCTGCCCCTGAGGAATGTTAC
ATTTCAGTTAATACTAAGGCGAACCGGTTTGGAAACTGTGGCCATCCCACCTCCGCTAACTTCAGATATG
AAACATGTTCCGATGAGGATGTATTTTGTGGGAAACTGGTGTGTACAGATGTTAGATACCTGCCCAAAGT
CAAACCCCTACACTCACTCCTCCAGGTTCCTTATGGAGAGGACTGGTGTTGGAGTATGGATGCCTATAAC
ATCACAGATGTCCCGGATGACGGAGATGTACAGAGCGGCACCTTCTGTGCCCCAAACAAAGTCTGCATGG
AGTATATCTGCACTGGTCGTGGGGTGCTCCAGTACAACTGTGAGCCACAGGAAATGTGTCACGGGAATGG
AGTGTGCAACAATTTCAAGCACTGTCACTGCGATGCTGGCTTCGCCCCTCCTGACTGTAGCAGTCCAGGA
AATGGGGGGAGTGTGGACAGTGGTCCTGTTGGTAAGCCCGCTGATCGACACTTGAGTCTCTCTTTTCTGG
CTGAAGAGAGTCCAGATGATAAAATGGAGGATGAAGAGGTAAACCTGAAAGTGATGGTGCTTGTGGTCCC
TATATTTCTTGTCGTTTTACTGTGCTGTCTAATGCTGATCGCCTACCTCTGGTCTGAAGTACAAGAAGTA
GTATCTCCACCGAGTTCATCAGAGTCTTCGTCTTCATCATCCTGGTCAGACTCTGACTCTCAGTGA

Translation (791 aa):
MSVAAAGRGFASSLSSPQIRRIALKEAKLTPHIWAALHWNLGLRLVPSVRVGILVLLIFLPSTFCDIGSV
YNSSYETVIPERLPGKGGKDPGGKVSYMLLMQGQKQLLHLEVKGHYPENNFPVYSYHNGILRQEMPLLSQ
DCHYEGYMEGVPGSFVSVNICSGLRGVLIKEETSYGIEPMLSSKNFEHVLYTMEHQPVVSCSVTPKDSPG
DTSHPPRSRKPDDLLVLTDWWSHTKYVEMFVVVNHQRFQMWGSNINETVQAVMDIIALANSFTRGINTEV
VLVGLEIWTEGDPIEVPVDLQTTLRNFNFWRQEKLVGRVRHDVAHLIVGHRPGENEGQAFLRGACSGEFA
AAVEAFHHEDVLLFAALMAHELGHNLGIQHDHPTCTCGPKHFCLMGEKIGKDSGFSNCSSDHFLRFLHDH
RGACLLDEPGRQSRMRRAANCGNGVVEDLEECDCGSDCDSHPCCSPTCTLKEGAQCSEGLCCYNCTFKKK
GSLCRPAEDVCDLPEYCDGSTQECPANSYMQDGTQCDRIYYCLGGWCKNPDKQCSRIYGYPARSAPEECY
ISVNTKANRFGNCGHPTSANFRYETCSDEDVFCGKLVCTDVRYLPKVKPLHSLLQVPYGEDWCWSMDAYN
ITDVPDDGDVQSGTFCAPNKVCMEYICTGRGVLQYNCEPQEMCHGNGVCNNFKHCHCDAGFAPPDCSSPG
NGGSVDSGPVGKPADRHLSLSFLAEESPDDKMEDEEVNLKVMVLVVPIFLVVLLCCLMLIAYLWSEVQEV
VSPPSSSESSSSSSWSDSDSQ


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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