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Report for CCDS55251.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55251.1 Public Homo sapiens 8 ZFAND1 24 110 108 CCDS HistoryNCBI Gene:79752Re-query CCDS DB by CCDS ID:55251.1Re-query CCDS DB by GeneID:79752See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55251.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523096.5 ENSP00000430736.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523096.5Link to Ensembl Protein Viewer:ENSP00000430736.1Re-query CCDS DB by Nucleotide ID:ENST00000523096Re-query CCDS DB by Protein ID:ENSP00000430736
Original member Current member NCBI NM_001170796.1 NP_001164267.1 Accepted alive Link to Nucleotide Sequence:NM_001170796.1Link to Protein Sequence:NP_001164267.1Re-query CCDS DB by Nucleotide ID:NM_001170796Re-query CCDS DB by Protein ID:NP_001164267Link to BLAST:NP_001164267.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001164267.1 261 Q8TCF1-3 261 100% 0 0

Chromosomal Locations for CCDS 55251.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 81702695 81702865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81702969 81703103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81713918 81714039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81714804 81714895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81714987 81715114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81717249 81717288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81718182 81718224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81721227 81721281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGGCGGAGTTGGACATCGGGCAGCACTGCCAGGTGGAGCATTGCCGGCAGCGAGATTTTCTTCCATTTG
TGTGTGATGATTGTTCAGGAATATTTTGCCTTGAACACAGAAGCAGGGAGTCTCATGGTTGTCCTGAGGT
GACTGTAATCAATGAGAGACTGAAGACAGATCAACATACATCTTACCCATGCTCTTTCAAAGACTGTGCT
GAGAGAGAACTTGTGGCAGTTATATGTCCTTATTGTGAGAAGAATTTTTGCCTGAGACACCGTCATCAGT
CAGATCATGAGTGTGAAAAACTGGAAATCCCAAAGCCTCGAATGGCTGCCACTCAGAAACTTGTTAAAGA
CATTATTGATTCCAAGACAGGAGAAACAGCAAGTAAACGATGGAAAGGTGCCAAAAATAGTGAAACAGCT
GCAAAGGTTGCATTGATGAAATTAAAGATGCATGCTGATGGCGATAAGTCATTACCACAGGTTTTCTTAC
CTAAAGGGAGCAAAGAGAAGAGCAAACCAATGTTCTTTTGCCACCGATGGAGCATTGGAAAGGCCATAGA
CTTTGCCGCTTCTCTAGCCAGGCTTAAAAATGACAATAACAAATTTACAGCTAAGAAATTAAGGCTGTGT
CACATTACTTCAGGAGAAGCCTTACCCTTGGATCATACTTTGGAAACCTGGATTGCTAAGGAGGATTGTC
CTTTATATAATGGTGGAAATATAATCTTGGAATATCTTAATGATGAAGAACAATTCTGTAAAAATGTTGA
ATCTTACTTGGAATAG

Translation (261 aa):
MAELDIGQHCQVEHCRQRDFLPFVCDDCSGIFCLEHRSRESHGCPEVTVINERLKTDQHTSYPCSFKDCA
ERELVAVICPYCEKNFCLRHRHQSDHECEKLEIPKPRMAATQKLVKDIIDSKTGETASKRWKGAKNSETA
AKVALMKLKMHADGDKSLPQVFLPKGSKEKSKPMFFCHRWSIGKAIDFAASLARLKNDNNKFTAKKLRLC
HITSGEALPLDHTLETWIAKEDCPLYNGGNIILEYLNDEEQFCKNVESYLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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