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Report for CCDS73699.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73699.1 Public Homo sapiens 15 GOLGA6L1 24 110 108 CCDS HistoryNCBI Gene:283767Re-query CCDS DB by CCDS ID:73699.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 73699.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614055.2 ENSP00000478478.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000614055.2Link to Ensembl Protein Viewer:ENSP00000478478.1Re-query CCDS DB by Nucleotide ID:ENST00000614055Re-query CCDS DB by Protein ID:ENSP00000478478
Original member Current member NCBI NM_001001413.3 NP_001001413.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001413.3Link to Protein Sequence:NP_001001413.3Re-query CCDS DB by Nucleotide ID:NM_001001413Re-query CCDS DB by Protein ID:NP_001001413Link to BLAST:NP_001001413.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001413.3 668 Q8N7Z2 668 100% 0 0

Chromosomal Locations for CCDS 73699.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 23128790 23128813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23129470 23130672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23131330 23131471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23131802 23131860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23133239 23133345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23133441 23133534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23133623 23133673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23134759 23134887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23136534 23136731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2007 nt):
ATGCTGATGTGGCCCCAACCCCACCTCCCTACCCATCCCCACCTCCCTACCCATCCCCACCTCCCTACCC
ATCCCCACCTCCCTACCCATCCCCACCTCCCTACCCATCCCCACCTCCCTACCCATCCCCACCTCCCTAC
CCATCCTATGATGTCCAAAGAAACCAGACAGAGCAAATTGGCCGAGGCCAAGGAACAGTTGACAGACCAT
CATCCCCAGACCAACCCTAGTGTTGGTACAGCAGCAAGCGACACCAAAAAGAAGAAAATAAATAATGGCA
CTAACCCTGAGACAACCACTTCTGGTGGTTGCCACTCGCCTGAGGATGAACAGAAGGCAAGCCACCAACA
TCAGGAAGCCCTAAGGAGGGAGCTAGAGGCCCAGGTTCATACCATACGAATCCTTACATGTCAGAAAACT
GAGCTTCAGATGGCACTCTACTACAGCCAGCATGCTGTCAAGCAGTTGGAAGGAGAGGCCAGGGATCTGA
TCAGCCGCCTGCATGATTCATGGAAGTTTGCAGGAGAGTTAGAGCAGGCTCTCTCTGCTGTCGCTACACA
GAAGAAGAAGGCGGATAGGTACATTGAGGAGTTAACAAAGGAGAGGGACGCCCTGAGTCTGGAACTGTAC
AGGAACACCATAACTGATGAGGAGCTGAAGGAGAAAAATGCCAAACTACAAGAAAAACTTCAACTTGTAG
AATCTGAAAAGTCTGAGATCCAGCTCAACGTAAAGGAGCTAAAAAGGAAACTGGAGAGGGCCAAGCTCCT
GCTGCCACAGCAGCAGCTGCAGGCGGAGGCTGACCACCTGGGTAAGGAGCTGCAGAGTGTGTCAGCAAAG
CTCCAAGCCCAGGTGGAAGAGAACGAGTTGTGGAACCGCCTGAACCAGCAACAGGAGGAGAAGATGTGGA
GGCAGGAGGAGAAGATACAGGAGTGGGAGGAGAAGATACAGGAGCAGGAGGAGAAGATACGGGAGCAGGA
GGAGAAGATACGGGAGCAGGAGGAGAAGATGCGGAGGCAGGAGGAGATGATGTGGGAGAAGGAGGAGAAG
ATGCGGAGGCAGGAGGAGATGATGTGGGAGAAGGAGGAGAAGATGCGGAGGCTGGAGGAGATGATGTGGG
AGAAGGAGGAGAAGATACGGGAGCTGGAAGAGAAGATGCACGAGCAGGAGAAGATACGGGAGCAGGAAGA
GAAGAGGCAGGAGGAGGAGAAGATACGCGAGCAGGAGAAGAGGCAGGAGCAGGAGGCGAAGATGTGGAGG
CAGGAGGAGAAGATACGGGAGCAGGAAGAGAAGATACGGGAGCAGGAGAAAAAGATGTGGAGGCAGGAGG
AGAAGATTCACGAGCAGGAGAAGATACGGGAGGAGGAGAAGAGGCAGGAGCAGGAGGAGATGTGGAGGCA
GGAGGAGAAGATAAGGGAGCAGGAGGAGATATGGAGGCAAAAGGAGAAGATGCACGAGCAGGAGAAGATA
CGGAAGCAGGAGGAGAAGGTGTGGAGGCAGGAGGAGAAGATGCACGACCAGGAGGAGAAGATACGGGAGC
AGGAGGAGAAGATGTGGAGGCAGGAGGAGAAGATAAGGGAGCAGGAGGAGAAGATACGGGAGCAGGAGGA
GAAGATACGAGAGCAGGAGGAGATGATGCAGGAACAGGAAGAGAAGATGGGGGAGCAGGAAGAGAAGATG
CAAGAACAGGAGAAGATGCGGAGGCAGGAGGAGAAGATAAGGGAGCAGGAGGAGAAGATACGGGAGCAGA
AGGAGAAGATACGAGAGCAGGAGGAGAAGATATGGGAGCAGGAGGAGAAGATACGAGAGCAGGAGGAGAT
GATGCAGGAACAGGAAGAGAAGATGTGGGAGCAGGAGGAGAAGATGTGTGAGCAGGAAGAGAAGATGCAA
GAACAGGAGGAGAAGATGCGGAGGCAGGAGGAGAAGATGTGGGAGCAGGAAGTGAGGCTGCGGCAGCAGG
AGGAGAAGATGCAGGAACACCAGGAGCACCTGGAAGCTGCCATCTAA

Translation (668 aa):
MLMWPQPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPMMSKETRQSKLAEAKEQLTDH
HPQTNPSVGTAASDTKKKKINNGTNPETTTSGGCHSPEDEQKASHQHQEALRRELEAQVHTIRILTCQKT
ELQMALYYSQHAVKQLEGEARDLISRLHDSWKFAGELEQALSAVATQKKKADRYIEELTKERDALSLELY
RNTITDEELKEKNAKLQEKLQLVESEKSEIQLNVKELKRKLERAKLLLPQQQLQAEADHLGKELQSVSAK
LQAQVEENELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEK
MRRQEEMMWEKEEKMRRLEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWR
QEEKIREQEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKI
RKQEEKVWRQEEKMHDQEEKIREQEEKMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKM
QEQEKMRRQEEKIREQEEKIREQKEKIREQEEKIWEQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQ
EQEEKMRRQEEKMWEQEVRLRQQEEKMQEHQEHLEAAI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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