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Report for CCDS12719.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12719.1 Public Homo sapiens 19 GRIN2D 24 110 108 CCDS HistoryNCBI Gene:2906Re-query CCDS DB by CCDS ID:12719.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12719.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263269.4 ENSP00000263269.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263269.4Link to Ensembl Protein Viewer:ENSP00000263269.2Re-query CCDS DB by Nucleotide ID:ENST00000263269Re-query CCDS DB by Protein ID:ENSP00000263269
Original member Current member NCBI NM_000836.4 NP_000827.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000836.4Link to Protein Sequence:NP_000827.2Re-query CCDS DB by Nucleotide ID:NM_000836Re-query CCDS DB by Protein ID:NP_000827Link to BLAST:NP_000827.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000827.2 1336 O15399 1336 100% 0 0

Chromosomal Locations for CCDS 12719.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 48398393 48398857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48404734 48405353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48413991 48414105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48414373 48414584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48414864 48415032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48416002 48416155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48419234 48419359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48419585 48419814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48421785 48421945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48441769 48441956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48442150 48442382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48442600 48443937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4011 nt):
ATGCGCGGCGCCGGTGGCCCCCGCGGCCCTCGGGGCCCCGCTAAGATGCTGCTGCTGCTGGCGCTGGCCT
GCGCCAGCCCGTTCCCGGAGGAGGCGCCGGGGCCGGGCGGGGCCGGTGGGCCCGGCGGCGGCCTCGGCGG
GGCGCGGCCGCTCAACGTGGCGCTCGTGTTCTCGGGGCCCGCGTACGCGGCCGAGGCGGCACGCCTGGGC
CCGGCCGTGGCGGCGGCGGTGCGCAGCCCGGGCCTAGACGTGCGGCCCGTGGCGCTGGTGCTCAACGGCT
CGGACCCGCGCAGCCTCGTGCTGCAGCTCTGCGACCTGCTGTCGGGGTTGCGCGTGCACGGCGTGGTCTT
CGAAGACGACTCGCGCGCGCCCGCCGTCGCGCCCATCCTCGACTTCCTGTCGGCGCAGACCTCGCTGCCC
ATCGTGGCCGTGCACGGCGGCGCCGCGCTCGTGCTCACGCCCAAGGAGAAGGGCTCCACCTTCCTGCAGC
TGGGCTCTTCCACCGAGCAACAGCTTCAGGTCATCTTTGAGGTGCTGGAGGAGTATGACTGGACGTCCTT
TGTAGCCGTGACCACTCGTGCCCCTGGCCACCGGGCCTTCCTGTCCTACATTGAGGTGCTGACTGACGGT
AGTCTGGTGGGCTGGGAGCACCGCGGAGCGCTGACGCTGGACCCTGGGGCGGGCGAGGCCGTGCTCAGTG
CCCAGCTCCGCAGTGTCAGCGCGCAGATCCGCCTGCTCTTCTGCGCCCGAGAGGAGGCCGAGCCCGTGTT
CCGCGCAGCTGAGGAGGCTGGCCTCACTGGATCTGGCTACGTCTGGTTCATGGTGGGGCCCCAGCTGGCT
GGAGGCGGGGGCTCTGGGGCCCCTGGTGAGCCCCCTCTTCTGCCAGGAGGCGCCCCCCTGCCTGCCGGGC
TGTTTGCAGTGCGCTCGGCTGGCTGGCGGGATGACCTGGCTCGGCGAGTGGCAGCTGGCGTGGCCGTAGT
GGCCAGAGGTGCCCAGGCCCTGCTGCGTGATTATGGTTTCCTTCCTGAGCTCGGCCACGACTGTCGCGCC
CAGAACCGCACCCACCGCGGCGAGAGTCTGCATAGGTACTTCATGAACATCACGTGGGATAACCGGGATT
ACTCCTTCAATGAGGACGGCTTCCTAGTGAACCCCTCCCTGGTGGTCATCTCCCTCACCAGAGACAGGAC
GTGGGAGGTGGTGGGCAGCTGGGAGCAGCAGACGCTCCGCCTCAAGTACCCGCTGTGGTCCCGCTATGGT
CGCTTCCTGCAGCCAGTGGACGACACGCAGCACCTCACGGTGGCCACGCTGGAGGAAAGGCCGTTTGTCA
TCGTGGAGCCTGCAGACCCTATCAGCGGCACCTGCATCCGAGACTCCGTCCCCTGCCGGAGCCAGCTCAA
CCGAACCCACAGCCCTCCACCGGATGCCCCCCGCCCGGAAAAGCGCTGCTGCAAGGGTTTCTGCATCGAC
ATTCTGAAGCGGCTGGCGCATACCATCGGCTTCAGCTACGACCTCTACCTGGTCACCAATGGCAAGCACG
GAAAGAAGATCGATGGCGTCTGGAACGGCATGATCGGGGAGGTGTTCTACCAGCGCGCAGACATGGCCAT
CGGCTCCCTCACCATCAACGAGGAGCGCTCCGAGATCGTGGACTTCTCCGTCCCCTTCGTGGAGACCGGC
ATCAGCGTCATGGTGGCGCGCAGCAATGGCACGGTGTCCCCCTCGGCCTTCCTCGAGCCCTACAGCCCCG
CCGTGTGGGTGATGATGTTCGTCATGTGCCTCACTGTGGTCGCCGTCACTGTTTTCATCTTCGAGTACCT
CAGTCCTGTTGGTTACAACCGCAGCCTGGCCACGGGCAAGCGCCCTGGCGGTTCAACCTTCACCATTGGG
AAATCCATCTGGCTGCTCTGGGCCCTGGTGTTCAATAATTCGGTGCCCGTGGAGAACCCCCGGGGAACCA
CCAGCAAAATCATGGTGCTGGTGTGGGCCTTCTTCGCCGTCATCTTCCTCGCCAGCTACACAGCCAACCT
GGCCGCCTTCATGATCCAGGAGGAGTACGTGGATACTGTGTCTGGGCTCAGTGACCGCAAGTTCCAGAGG
CCCCAGGAGCAGTACCCGCCCCTGAAGTTTGGGACCGTGCCCAACGGCTCCACGGAGAAGAACATCCGCA
GCAACTATCCCGACATGCACAGCTACATGGTGCGCTACAACCAGCCCCGCGTAGAGGAAGCGCTCACTCA
GCTCAAGGCAGGGAAGCTGGACGCCTTCATCTACGATGCTGCAGTGCTCAATTACATGGCCCGCAAGGAC
GAGGGCTGCAAGCTTGTCACCATCGGCTCCGGCAAGGTCTTCGCCACGACAGGCTATGGCATCGCCCTGC
ACAAGGGCTCCCGCTGGAAGCGGCCCATCGACCTGGCGTTGCTGCAGTTCCTGGGGGATGATGAGATCGA
GATGCTGGAGCGGCTGTGGCTCTCTGGGATCTGCCACAATGACAAAATCGAGGTGATGAGCAGCAAGCTG
GACATCGACAACATGGCGGGCGTCTTCTACATGCTCCTGGTGGCCATGGGCCTGTCCCTGCTGGTCTTCG
CCTGGGAGCACCTGGTGTACTGGCGCCTGCGGCACTGCCTGGGGCCCACCCACCGCATGGACTTCCTGCT
GGCCTTCTCCAGGGGCATGTACAGCTGCTGCAGCGCTGAGGCCGCCCCACCGCCCGCCAAGCCCCCGCCG
CCGCCACAGCCCCTGCCCAGCCCCGCGTACCCCGCGCCGCGGCCGGCTCCCGGGCCCGCACCTTTCGTGC
CCCGCGAGCGCGCCTCAGTGGACCGCTGGCGCCGGACCAAGGGCGCGGGGCCGCCGGGGGGCGCGGGCCT
GGCCGACGGCTTCCACCGCTACTACGGCCCCATCGAGCCGCAGGGCCTAGGCCTCGGCCTGGGCGAAGCG
CGCGCGGCACCGCGGGGCGCAGCCGGGCGCCCGCTGTCCCCGCCGGCCGCTCAGCCCCCGCAGAAGCCGC
CGCCCTCCTATTTCGCCATCGTACGCGACAAGGAGCCAGCCGAGCCCCCCGCCGGCGCCTTCCCCGGCTT
CCCGTCGCCGCCCGCGCCCCCCGCCGCCGCGGCCACCGCCGTCGGGCCGCCACTCTGCCGCTTGGCCTTC
GAGGACGAGAGCCCGCCGGCGCCCGCGCGGTGGCCGCGCTCGGACCCCGAGAGCCAACCCCTGCTGGGGC
CAGGCGCGGGCGGCGCGGGGGGCACGGGGGGCGCAGGCGGAGGAGCCCCGGCCGCTCCGCCCCCGTGCCG
CGCCGCGCCGCCCCCGTGCCCTTACCTCGATCTCGAGCCGTCGCCGTCGGACTCGGAGGACTCGGAGAGC
CTGGGCGGCGCGTCGCTGGGCGGCCTGGAGCCCTGGTGGTTCGCCGACTTCCCTTACCCGTATGCCGAGC
GCCTCGGGCCGCCGCCCGGCCGCTACTGGTCGGTCGACAAGCTCGGGGGCTGGCGCGCCGGGAGCTGGGA
CTACCTGCCCCCGCGCAGCGGTCCGGCCGCCTGGCACTGTCGGCACTGCGCCAGCCTGGAGCTGCTGCCG
CCGCCGCGCCATCTCAGCTGCTCGCACGATGGCCTGGACGGCGGCTGGTGGGCGCCACCGCCTCCACCCT
GGGCCGCCGGGCCCCTGCCCCGACGCCGGGCCCGCTGCGGGTGCCCGCGGTCGCACCCGCACCGCCCGCG
GGCCTCGCACCGCACGCCCGCCGCCGCCGCGCCCCACCACCACAGGCACCGGCGCGCCGCTGGGGGCTGG
GACCTCCCGCCGCCCGCGCCCACCTCGCGCTCGCTCGAGGACCTCAGCTCGTGCCCTCGCGCCGCCCCTG
CGCGCAGGCTTACCGGGCCCTCCCGCCACGCTCGCAGGTGTCCGCACGCCGCGCACTGGGGGCCGCCGCT
GCCCACAGCTTCCCACCGGAGACACCGGGGCGGGGACCTGGGCACCCGCAGGGGCTCGGCGCACTTCTCT
AGCCTCGAGTCCGAGGTATGA

Translation (1336 aa):
MRGAGGPRGPRGPAKMLLLLALACASPFPEEAPGPGGAGGPGGGLGGARPLNVALVFSGPAYAAEAARLG
PAVAAAVRSPGLDVRPVALVLNGSDPRSLVLQLCDLLSGLRVHGVVFEDDSRAPAVAPILDFLSAQTSLP
IVAVHGGAALVLTPKEKGSTFLQLGSSTEQQLQVIFEVLEEYDWTSFVAVTTRAPGHRAFLSYIEVLTDG
SLVGWEHRGALTLDPGAGEAVLSAQLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGSGYVWFMVGPQLA
GGGGSGAPGEPPLLPGGAPLPAGLFAVRSAGWRDDLARRVAAGVAVVARGAQALLRDYGFLPELGHDCRA
QNRTHRGESLHRYFMNITWDNRDYSFNEDGFLVNPSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSRYG
RFLQPVDDTQHLTVATLEERPFVIVEPADPISGTCIRDSVPCRSQLNRTHSPPPDAPRPEKRCCKGFCID
ILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIG
KSIWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGLSDRKFQR
PQEQYPPLKFGTVPNGSTEKNIRSNYPDMHSYMVRYNQPRVEEALTQLKAGKLDAFIYDAAVLNYMARKD
EGCKLVTIGSGKVFATTGYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLSGICHNDKIEVMSSKL
DIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCLGPTHRMDFLLAFSRGMYSCCSAEAAPPPAKPPP
PPQPLPSPAYPAPRPAPGPAPFVPRERASVDRWRRTKGAGPPGGAGLADGFHRYYGPIEPQGLGLGLGEA
RAAPRGAAGRPLSPPAAQPPQKPPPSYFAIVRDKEPAEPPAGAFPGFPSPPAPPAAAATAVGPPLCRLAF
EDESPPAPARWPRSDPESQPLLGPGAGGAGGTGGAGGGAPAAPPPCRAAPPPCPYLDLEPSPSDSEDSES
LGGASLGGLEPWWFADFPYPYAERLGPPPGRYWSVDKLGGWRAGSWDYLPPRSGPAAWHCRHCASLELLP
PPRHLSCSHDGLDGGWWAPPPPPWAAGPLPRRRARCGCPRSHPHRPRASHRTPAAAAPHHHRHRRAAGGW
DLPPPAPTSRSLEDLSSCPRAAPARRLTGPSRHARRCPHAAHWGPPLPTASHRRHRGGDLGTRRGSAHFS
SLESEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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