NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS5328.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5328.1 Public Homo sapiens 7 MRM2 24 110 108 CCDS HistoryNCBI Gene:29960Re-query CCDS DB by CCDS ID:5328.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5328.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000242257.14 ENSP00000242257.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000242257.14Link to Ensembl Protein Viewer:ENSP00000242257.8Re-query CCDS DB by Nucleotide ID:ENST00000242257Re-query CCDS DB by Protein ID:ENSP00000242257
Original member Current member NCBI NM_013393.3 NP_037525.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013393.3Link to Protein Sequence:NP_037525.1Re-query CCDS DB by Nucleotide ID:NM_013393Re-query CCDS DB by Protein ID:NP_037525Link to BLAST:NP_037525.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037525.1 246 Q9UI43 246 100% 0 0

Chromosomal Locations for CCDS 5328.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 2235122 2235564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2239418 2239707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2242162 2242169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (741 nt):
ATGGCGGGGTACTTGAAGCTGGTGTGTGTTTCCTTTCAGCGTCAAGGGTTCCACACTGTTGGGAGTCGCT
GCAAGAATCGGACAGGCGCTGAGCACCTGTGGCTGACCCGACATCTCAGGGACCCATTTGTGAAGGCTGC
GAAGGTGGAGAGTTACCGGTGTCGAAGCGCCTTCAAGCTCCTGGAGGTGAACGAGAGGCACCAGATTCTG
CGGCCCGGCCTTCGGGTGTTAGACTGTGGGGCAGCTCCTGGGGCCTGGAGTCAGGTGGCGGTGCAGAAGG
TCAACGCCGCAGGCACAGATCCCAGCTCTCCTGTTGGCTTCGTGCTTGGGGTAGATCTTCTTCACATATT
CCCCCTGGAAGGAGCAACTTTTCTGTGCCCTGCTGACGTGACTGACCCGAGAACCTCACAGAGAATCCTC
GAGGTGCTTCCTGGCAGGAGAGCAGATGTGATTCTGAGCGACATGGCGCCCAATGCCACAGGGTTCCGGG
ACCTCGATCATGACAGGCTCATCAGCCTGTGCCTGACCCTTCTCAGCGTGACCCCAGACATCCTGCAACC
TGGGGGGACATTCCTTTGTAAAACCTGGGCTGGAAGTCAAAGCCGTCGGTTACAGAGGAGACTGACAGAG
GAATTCCAGAATGTAAGGATCATCAAACCTGAAGCCAGCAGGAAAGAGTCATCAGAAGTGTACTTCTTGG
CCACACAGTACCACGGAAGGAAGGGCACTGTGAAGCAGTGA

Translation (246 aa):
MAGYLKLVCVSFQRQGFHTVGSRCKNRTGAEHLWLTRHLRDPFVKAAKVESYRCRSAFKLLEVNERHQIL
RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRIL
EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTE
EFQNVRIIKPEASRKESSEVYFLATQYHGRKGTVKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH