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Report for CCDS16651.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16651.1 Public Mus musculus 2 Mageb3 23 108 98 CCDS HistoryNCBI Gene:17147Re-query CCDS DB by CCDS ID:16651.1Re-query CCDS DB by GeneID:17147See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 16651.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000104936.3 ENSMUSP00000100541.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000104936.3Link to Ensembl Protein Viewer:ENSMUSP00000100541.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000104936Re-query CCDS DB by Protein ID:ENSMUSP00000100541
Original member Current member NCBI NM_008545.2 NP_032571.2 Accepted alive Link to Nucleotide Sequence:NM_008545.2Link to Protein Sequence:NP_032571.2Re-query CCDS DB by Nucleotide ID:NM_008545Re-query CCDS DB by Protein ID:NP_032571Link to BLAST:NP_032571.2

Chromosomal Locations for CCDS 16651.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 121954227 121955219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (993 nt):
ATGCCTAGGGGTCAAAAGAGTAAGAGCCGCTCCCGTGCTAAACGACAGCAGTCACGCAGGGAGGTTCAAG
TAGTTCAGCCCACTGCAGAGGAAGCAGGGTCTTCTCCTGTTGACCTGAGTGCTGGGTCCAGCTTCCCTGG
TGGTTCTGCTCCTCAGGGTGTGAAAAACCCTGGATCTTTTGGTGCAGGTGTATCCTGCACAGGCTCTGGT
ATAGGTGGTAGAAATGCTACTGTCCTGCCTGATACAAAAAGTTCAGATGGCACCCAGGCAGGGACTTCCA
TTCAGCACACACTGAAAGATCCTATCATGAGGAAGGCTAGTGTGCTGATAGAATTCCTGCTAGATAAATT
TAAGATGAAAGAAGCAGTTACAAGAAGTGAAATGCTGGCAGTAGTTAACAAGAAGTATAAGGAGCAATTC
CCTGAGATCCTCAGGAGAACTTCTGCACGCCTAGAATTGGTCTTTGGTCTTGAGTTGAAGGAAATTGATC
CCAGCACTCATTCCTATTTGCTGGTGGGCAAACTGGGTCTTTCCACTGAGGGAAGTTTGAGTAGTAACTG
GGGGTTGCCTAGGACAGGTCTCCTAATGTCTGTCCTAGGTGTGATCTTCATGAAGGGTAACCGTGCCACT
GAGCAAGAGGTCTGGCAATTTCTGCATGGAGTGGGGGTATATGCTGGGAAGAAGCACTTGATCTTTGGCG
AGCCTGAGGAGTTTATAAGAGATGTAGTGCAGGAAAATTACCTGGAGTACCGCCAGGTACCTGGCAGTGA
TCCCCCAAGCTATGAGTTCCTGTGGGGACCCAGAGCCCATGCTGAAACAACCAAGATGAAAGTCCTGAAA
GTTTTAGCTAAAGTCAATGGCACAGTCCCTAGTGCCTTCCCTAATCTCTACCAGTTGGCTCTTAGAGATC
AGGCAGGAGGGGTGCCAAGAAGTAGAGTTCAAGGCAAGGGTGTTCATTCCAAGGCCCCATCCCAAAAGTC
CTCTAATGTGTAG

Translation (330 aa):
MPRGQKSKSRSRAKRQQSRREVQVVQPTAEEAGSSPVDLSAGSSFPGGSAPQGVKNPGSFGAGVSCTGSG
IGGRNATVLPDTKSSDGTQAGTSIQHTLKDPIMRKASVLIEFLLDKFKMKEAVTRSEMLAVVNKKYKEQF
PEILRRTSARLELVFGLELKEIDPSTHSYLLVGKLGLSTEGSLSSNWGLPRTGLLMSVLGVIFMKGNRAT
EQEVWQFLHGVGVYAGKKHLIFGEPEEFIRDVVQENYLEYRQVPGSDPPSYEFLWGPRAHAETTKMKVLK
VLAKVNGTVPSAFPNLYQLALRDQAGGVPRSRVQGKGVHSKAPSQKSSNV


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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