NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS44435.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44435.1 Public Homo sapiens 10 FAM149B1 24 110 108 CCDS HistoryNCBI Gene:317662Re-query CCDS DB by CCDS ID:44435.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44435.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000242505.11 ENSP00000242505.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000242505.11Link to Ensembl Protein Viewer:ENSP00000242505.6Re-query CCDS DB by Nucleotide ID:ENST00000242505Re-query CCDS DB by Protein ID:ENSP00000242505
Original member Current member NCBI NM_173348.2 NP_775483.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173348.2Link to Protein Sequence:NP_775483.1Re-query CCDS DB by Nucleotide ID:NM_173348Re-query CCDS DB by Protein ID:NP_775483Link to BLAST:NP_775483.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775483.1 582 Q96BN6-1 582 100% 0 0

Chromosomal Locations for CCDS 44435.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 73168340 73168386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73174687 73174791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73177846 73177975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73192556 73192698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73193477 73193593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73208619 73208786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73210251 73210438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73228060 73228184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73230422 73230525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73232939 73233163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73234817 73234940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73235193 73235318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73239312 73239384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73240946 73241019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1749 nt):
ATGATCTCCAGATACACTCGGAAGGCGGTGCCACAGAGCTTGGAGCTGAAAGGAATAACAAAACATGCTC
TTAACCATCATCCCCCTCCAGAGAAGCTGGAGGAAATTTCCCCCACCAGTGACAGTCATGAGAAAGACAC
AAGTTCCCAAAGCAAGTCTGACATCACAAGAGAATCATCTTTTACATCAGCCGACACTGGGAATTCACTG
TCTGCTTTTCCAAGTTATACAGGCGCAGGGATATCTACTGAAGGAAGCTCGGACTTCTCCTGGGGATATG
GTGAACTCGATCAAAATGCCACTGAAAAAGTCCAGACAATGTTCACAGCCATTGATGAACTCTTGTATGA
GCAGAAGTTGAGTGTGCATACCAAGAGTCTACAAGAAGAGTGCCAACAGTGGACAGCTAGCTTTCCTCAC
CTCAGGATTCTAGGTAGGCAGATAATCACTCCAAGTGAAGGTTATAGATTGTATCCTAGATCCCCTTCTG
CTGTTTCCGCTTCATATGAAACAACCTTGTCTCAAGAAAGAGATTCTACTATATTTGGTATAAGGGGAAA
GAAGTTACATTTTTCATCTTCTTATGCTCATAAAGCATCTTCCATTGCCAAATCCTCCAGCTTTTGTTCT
ATGGAAAGAGATGAGGAAGACTCTATAATCGTCTCAGAAGGAATAATTGAGGAATACCTAGCATTCGATC
ACATAGATATAGAAGAGGGATTTCATGGGAAGAAATCAGAAGCAGCTACAGAGAAACAGAAATTAGGGTA
TCCTCCCATTGCTCCATTTTACTGCATGAAAGAAGATGTCCTTGCTTATGTGTTTGACAGTGTATGGTGC
AAGGTTGTGAGCTGTATGGAGCAGTTGACACGTAGTCACTGGGAAGGATTTGCCTCTGATGATGAGAGTA
ATGTTGCAGTTACCAGACCCGATTCAGAAAGTTCCTGTGTGCTGAGTGAACTACATCCTTTGGTGTTACC
GCGAGTGCCACAGTCTAAGGTGCTGTACATTACCTCAAATCCGATGAGTCTCTGTCAAGCAAGCAGACAT
CAGCCAAATGTGAATGATCTCTTGGTTCATGGAATGCCTCTACAGCCAAGAAATCTCTCCCTAATGGACA
AGCTCCTAGATCTTGATGACAAGCTACTTATGAGGCCTGGGTCCAGTACCATCCTTTCAACTCGAAATTG
GCCAAATCGAGCTGTGGAGTTTAGTACATCATCTCTGTCATACACAGTGCAGTCCACCAGGAGACGCAAT
CCACCACCACGAACTCTTCATCCGATCAGCACGAGCCATTCATGTGCTGAAACACCAAGATCTGTGGAAG
AAATCCTCAGAGGAGCCCGAGTCCCAGTGGCACCCGACTCGCTCTCCTCTCCCTCACCGACGCCCCTGAG
TCGAAATAATCTGCTACCACCTATTGGCACAGCTGAAGTGGAACATGTGAGCACTGTGGGGCCACAAAGA
CAGATGAAACCCCATGGCGACTCTAGTCGAGCTCAAAGTGCGGTGGTGGATGAACCTAACTATCAGCAGC
CACAAGAAAGGCTCCTTTTGCCCGACTTTTTCCCCAGGCCCAACACAACTCAATCATTTTTGCTGGATAC
ACAGTATCGTCGCTCATGTGCAGTTGAGTATCCTCATCAGGCCCGACCTGGCAGGGGATCTGCAGGTCCT
CAGTTACATGGGTCTACAAAATCTCAAAGCGGAGGCAGACCAGTCTCTCGAACCAGGCAGGGACCATAA

Translation (582 aa):
MISRYTRKAVPQSLELKGITKHALNHHPPPEKLEEISPTSDSHEKDTSSQSKSDITRESSFTSADTGNSL
SAFPSYTGAGISTEGSSDFSWGYGELDQNATEKVQTMFTAIDELLYEQKLSVHTKSLQEECQQWTASFPH
LRILGRQIITPSEGYRLYPRSPSAVSASYETTLSQERDSTIFGIRGKKLHFSSSYAHKASSIAKSSSFCS
MERDEEDSIIVSEGIIEEYLAFDHIDIEEGFHGKKSEAATEKQKLGYPPIAPFYCMKEDVLAYVFDSVWC
KVVSCMEQLTRSHWEGFASDDESNVAVTRPDSESSCVLSELHPLVLPRVPQSKVLYITSNPMSLCQASRH
QPNVNDLLVHGMPLQPRNLSLMDKLLDLDDKLLMRPGSSTILSTRNWPNRAVEFSTSSLSYTVQSTRRRN
PPPRTLHPISTSHSCAETPRSVEEILRGARVPVAPDSLSSPSPTPLSRNNLLPPIGTAEVEHVSTVGPQR
QMKPHGDSSRAQSAVVDEPNYQQPQERLLLPDFFPRPNTTQSFLLDTQYRRSCAVEYPHQARPGRGSAGP
QLHGSTKSQSGGRPVSRTRQGP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH