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Report for CCDS12767.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12767.1 Public Homo sapiens 19 FLT3LG 24 110 108 CCDS HistoryNCBI Gene:2323Re-query CCDS DB by CCDS ID:12767.1Re-query CCDS DB by GeneID:2323See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12767.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000597551.6 ENSP00000468977.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000597551.6Link to Ensembl Protein Viewer:ENSP00000468977.1Re-query CCDS DB by Nucleotide ID:ENST00000597551Re-query CCDS DB by Protein ID:ENSP00000468977
Original member Current member EBI ENST00000594009.5 ENSP00000469613.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000594009.5Link to Ensembl Protein Viewer:ENSP00000469613.1Re-query CCDS DB by Nucleotide ID:ENST00000594009Re-query CCDS DB by Protein ID:ENSP00000469613
Original member Current member EBI ENST00000600429.5 ENSP00000470453.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000600429.5Link to Ensembl Protein Viewer:ENSP00000470453.1Re-query CCDS DB by Nucleotide ID:ENST00000600429Re-query CCDS DB by Protein ID:ENSP00000470453
Original member Current member NCBI NM_001204502.2 NP_001191431.1 Accepted alive Link to Nucleotide Sequence:NM_001204502.2Link to Protein Sequence:NP_001191431.1Re-query CCDS DB by Nucleotide ID:NM_001204502Re-query CCDS DB by Protein ID:NP_001191431Link to BLAST:NP_001191431.1
Original member Current member NCBI NM_001204503.2 NP_001191432.1 Accepted alive Link to Nucleotide Sequence:NM_001204503.2Link to Protein Sequence:NP_001191432.1Re-query CCDS DB by Nucleotide ID:NM_001204503Re-query CCDS DB by Protein ID:NP_001191432Link to BLAST:NP_001191432.1
Original member Current member NCBI NM_001459.4 NP_001450.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001459.4Link to Protein Sequence:NP_001450.2Re-query CCDS DB by Nucleotide ID:NM_001459Re-query CCDS DB by Protein ID:NP_001450Link to BLAST:NP_001450.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191431.1 235 P49771-1 235 100% 0 0
NP_001191432.1 235 P49771-1 235 100% 0 0
NP_001450.2 235 P49771-1 235 100% 0 0

Chromosomal Locations for CCDS 12767.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 49474640 49474672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49475691 49475801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49476145 49476198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49476423 49476566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49478909 49479047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49480298 49480476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49480552 49480599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (708 nt):
ATGACAGTGCTGGCGCCAGCCTGGAGCCCAACAACCTATCTCCTCCTGCTGCTGCTGCTGAGCTCGGGAC
TCAGTGGGACCCAGGACTGCTCCTTCCAACACAGCCCCATCTCCTCCGACTTCGCTGTCAAAATCCGTGA
GCTGTCTGACTACCTGCTTCAAGATTACCCAGTCACCGTGGCCTCCAACCTGCAGGACGAGGAGCTCTGC
GGGGGCCTCTGGCGGCTGGTCCTGGCACAGCGCTGGATGGAGCGGCTCAAGACTGTCGCTGGGTCCAAGA
TGCAAGGCTTGCTGGAGCGCGTGAACACGGAGATACACTTTGTCACCAAATGTGCCTTTCAGCCCCCCCC
CAGCTGTCTTCGCTTCGTCCAGACCAACATCTCCCGCCTCCTGCAGGAGACCTCCGAGCAGCTGGTGGCG
CTGAAGCCCTGGATCACTCGCCAGAACTTCTCCCGGTGCCTGGAGCTGCAGTGTCAGCCCGACTCCTCAA
CCCTGCCACCCCCATGGAGTCCCCGGCCCCTGGAGGCCACAGCCCCGACAGCCCCGCAGCCCCCTCTGCT
CCTCCTACTGCTGCTGCCCGTGGGCCTCCTGCTGCTGGCCGCTGCCTGGTGCCTGCACTGGCAGAGGACG
CGGCGGAGGACACCCCGCCCTGGGGAGCAGGTGCCCCCCGTCCCCAGTCCCCAGGACCTGCTGCTTGTGG
AGCACTGA

Translation (235 aa):
MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDEELC
GGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQLVA
LKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRT
RRRTPRPGEQVPPVPSPQDLLLVEH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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