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Report for CCDS51749.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51749.1 Public Mus musculus 6 D630045J12Rik 23 108 98 CCDS HistoryNCBI Gene:330286Re-query CCDS DB by CCDS ID:51749.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 51749.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000169256.4 ENSMUSP00000130121.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169256.4Link to Ensembl Protein Viewer:ENSMUSP00000130121.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169256Re-query CCDS DB by Protein ID:ENSMUSP00000130121
Original member Current member NCBI NM_194061.3 NP_918950.2 Accepted alive Link to Nucleotide Sequence:NM_194061.3Link to Protein Sequence:NP_918950.2Re-query CCDS DB by Nucleotide ID:NM_194061Re-query CCDS DB by Protein ID:NP_918950Link to BLAST:NP_918950.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_918950.2 1940 Q68FD9 1940 100% 0 0

Chromosomal Locations for CCDS 51749.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 38128321 38128575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38130782 38130927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38136834 38136994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38139423 38139469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38142592 38142909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38147120 38147273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38148336 38148559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38149556 38149761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38155130 38155245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38158048 38158244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38168091 38168275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38174148 38174325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38177607 38177755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38178831 38178890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38181314 38181497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38183965 38184092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38190551 38190728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38191676 38191764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38194384 38197089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38253868 38254009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5823 nt):
ATGGAGCGGGAGCCCCGCGCCAGGGTTGCACTGGTGCCGGAGCGGTGCGGCCGCGGGCCTTCCTCCCGCC
AC
CGCCGCCCGGGGCTGCTGCTCCCCGGCCTCTGGCTGCTGCTGCTCGCCGGGCCGGCCTCGTGCGCCCC
A
GATGACCTCTCCCTGGCTCAGCACAGCCATCCTGTACGCCCCTCGGACTTCCTGCCAGAGAGAAGCATC
CTG
CACAGTGCTGCACAAGTGACCTTATCAGAGACTGTTCCCAGGTCCCAACCAAGCATCTCTGCCCTTG
TC
CTCTCCTCTCCGTCAGCGACAGCTTTTGATACAGCCTTTTTAAGCCAGAGACAACAGACTCAAAGTAC
A
GCGGAGCCCAGTTTCTTTGAGGCAAATTACGGATCCGTGACGAGTAATGAGGTGGCCCTCGATGATGAG
GAG
ATGGATAACTTTTTGCCAGATGCTCATTGGACCTCTTCAAGGGGGGTTTCCCCAATGCGGTATATCA
CA
CCGAGTCCACCAGAGCCACCCCAGGAAATGCTGGAGCCTGGCACGACCCCATCACTTCCCACCATTTC
T
TTGCCGGATGAAGTGCTGTCCGGATGTCAGAACACAGTGCAACAGGCAACTGTATATGTGGAGCCGTCC
ACG
TACTTCGGCACTTCTTGGTCAGCTTTTCTCACGTCTGAGGGCATCATTCCAACTCCTAGTAGGAATT
CG
GTGCTTCATCCTATAGAAATTCACAGCCAGTTATCAAGCAAGGCTTTGCCAGAGACAGTAGCTTCTGT
A
ACAGAGGGCGCAGAAAACCTCCTTTTTAGCTCCCGGATTTCAGTGTCTCAGCCATCAGGCAATGGCATG
ACT
CAACAGCCATCTGTCCCCCTGTGGGAGGTCTCACAGCCTCTAGTGGGTGTCCTGGCCACAAGCTCGG
AC
AGATACCCTAATGAGACCACTGCTTGGATCGAACACCCAGAGGAAGCCATCGCTCTAAGAGCACACCC
T
GGCATAACCACGTCACCCACAGACCCCACTTTTAGCAGTCAGCCTTCTGCTCTATTTTCAACCCCACTT
TCA
TCTGTGTCTTTTGCTACCCAATTACCTGGTGTTTCGGAGGACTCCTTCCTCTCTAGTGAGGCCAGGG
GA
GCCTTAGAGTCATGGCATAGCTCCCCAGTCCCCAGTTTTACTGACCATCCTTATGTCCTGAGCCCCGA
G
TCTTCCCTGAGACCACACACAGGGTGTGTGTCTTGCGTTGTCTCATCATTTCAACAAGAACTGGCCAGG
AGC
CTAACAGAGAAGGACATGGGGTCAGGCGACAGGCTTGAGACTTTGTCTACTGCCTCGGTAGAGGCAA
GT
CATGTCTCTCCATTGAGCAGTGTGGGCACAGACCTCTCTGAACTTGAAGAGCCTCAAGAATTTAATAC
G
CTTTTCCCTTCCAGACCTGTGTTTTCCTTTTCTTCCAGACCTGTGGGGCTGTGGAAAGCCAGCATGGAT
GTG
TCACCCGAGGTGGATGTGAGTGGCATTGCCATCACTCAGGTGTACCCTTCCCATGGCCGCCTCTCCA
CA
CCAAGCTCACTGGATTCGACTTTTGGCTTCTCTGTCACCAGTGATCTAGTGATGTCATCCAGTATGAT
C
CATCTGTTGTCCTCTGTCATCCCCAGCACCCATTTTGACTCATCTTTCTCCTTGACTGCAAATCAAAAC
AGT
CCATCCTTTCCAGCTGGAAAGCCAAGCCTTCTCACCTCTCCCAGTCTGGTCCCCTCAGCACAGTCTA
GC
GCTTTCTCTCACGGAGCACCTACCAGCTCTCTGGAACTCCAGTCTGGAAGTCGTTTGGATTTCACATC
C
GGCTTTTACTCCACTCCGCCCCTGGACTTCAGCACTCCAGCCCCTTCACGGTCAGACGAGCTTGCTTTC
CCA
TCTTTGATGTCAAGCGATCCATCAACCTTCTTTTCTCAAACTTTTTCCACCATGGCTGAGACATTTT
CA
CTGTCCAACTCTATGAATTTGCAATCACCTCAGCTTTCTGTTCTTAATCCCACAAGTCTAGAGCCGTC
T
CAGCCACAGTCAAGTGCAGACCTTCTTTTGAACACAGTCACTGTTCTTCCTAGTCCCCCCGAGAGGCCC
CCA
CTTTCAAGCTCCCCCTCTGACTCTCTCGAGTTCACCGAAGTATCCAGAGTTTCACTGAGAGAATCCC
AT
GTTCATCTTACCTCAGCTTTCTCTGAAACTACCTCTGCCTTTGAATTTTCACCCATTCCCCATGAGTC
C
ACTATCAGCACACTGGTGCCCTCCAGCTCTGAGCCCTCTCTTGGCATCTACGCAGCTGGGACTCACCTC
ACA
TCACTGCCAACAACTGTTTTCCATTTGACACCCATTTTAACCGAGTCATCTCCATTCTCGACTCTGA
CA
CCTTCCGATGGCAGTGTGCGTGTGACAGATCATCACACACCAGTCTTACCCACACCCTCCAGTGTCAT
T
CCAAGCAGCACAGAGTCGATCTCTGACCCGTACCTGTCAGCCTCCTCATCACTTGTTTCTGAAGTAAGC
CCT
TCACCTCCGCCCACAAAGCCAGTCATGGGCTCATCATTGACATCCACAGATTTCCCGCCCAGTACTT
CC
CCAGAACTAAGTACATCCCTGGAACTGAGCATGCCCAGTGCCAGCACTGCCCCTGGTGATACTGTGGA
C
TCTGCTCTGAACAGCGAGCCTATGAGTCAGAACCCTCAGGGGAACAGTGTACCCCCTCCCCAACCCTCC
CTC
GGTCCTGCTACCACCTCCACGCTTGAAGCCACAGTTGGTACACCAGCACTGGCCACAGCCAAGCCGC
CA
TATGTGTGTGATATTACGGTTCCCGATGTCTATTTGATCACAACTGTGCTGGCCAGACGAGCTGTGCA
G
GAGTACATCATTACATCAATTAAAGAAGTGCTGAGAATCCACTTCAACCGTGCGGTGGAGCTAAAGGTT
TAT
GAACTGTTCACAGACTTCACATTTCTGGTAACGTCTGGTCCTTTTGTTTACACGGCGATATCAGTCA
TC
AACGTCCTCATCAATAGCAAACTTGTGCGTGGCCAGACGCCTTTAATCCTGTCTGTGAAGCCATCTTT
T
CTCGTGCCAGATCCCAGGTTTCAAGTTCAAACAGTACTGCAGTTCGTGCCTCCGAGTGTCGATACTGGC
TTC
TGCAACTTCACTCAGAGCATTGAGAAAGGCCTGGTGACAGCTCTCTTTGAAGTGAGGAAACACCAGG
GA
ACATATAACCTCACAGTGCAGATTGTGAATGTCACCATTGCTTCTTCGAGGGTGGCTCCCCGGAGGGG
C
CCAGTGAATATTATCTTTGCTGTTAAAGGCTCGCAAGGTTTTCTGAATGGGTCGGAGGTGAGCGATCTG
CTG
AGGAACCTGACGGTGGTGGAGTTCAGCTTCTACCTGGGGTACCCGGTGCTACAGATCGCAGAGCCCT
TC
CAATACCCGCAGCTCAATTTATCTCAGTTACTGAAGTCCTCTTGGGTCAGAACAGTCCTCCTGGGTGT
A
GTGGAAAAACAGCTCCACAATGAAGTGTTTCCAGCCGAGATGGAGCGCAAACTGGCTCAGCTGCTCAGC
GAG
GTGCCCACCCGAAGACGCGTGTGGCGGAGAGCCACTGTAGCTGCTGGGAACAGCGTGGTACAGGTGG
TG
AACGTGTCCAGGCTGGAGGGAGATGACAACCCGGTGCAGCTCATCTACTTTGTGGAGAATCAAGATGG
A
GAGAGACTCAGTGCAGTCAAGTCTTCAGATCTGATCAACAAGGTAGACCTCCAGAGGGCAGCCATCATC
CTG
GGGTACCGGATTCAAGGCGTCATTGCCCAGCCTGTGGACAGGGTGAAGAGGCCATCCCCAGAGTCAC
AG
AGCAACAACCTCTGGGTCGTGGTTGGCGTGGTCATTCCCGTGCTGGTGGTCACCGTAATTGTTGTTAT
C
CTCTACTGGAAGTTGTGCCGCACGGACAAGCTAGACTTCCAGCCAGACACGGTGGCCAACATACAGCAG
CGG
CAGAAGCTGCAGATCCCCAGCGTGAAGGGCTTCGATTTTGCTAAGCAGCATCTGGGCCAGCACAATA
AA
GACGACATCCTGATTATTCATGAGCCAGCGCCACTGCCAGGCCCTGTGAAGGACCACACCACACCCTC
A
GAAAACGGAGATGTGCCGAGCCCCAAGTCAAAGCTCCCTTCCAAGAACATACGGCTCAGAGGGAGAGTT
TCC
CCCTCAGATGCTGACTCAACAGTCAGCGAGGAGTCCAGCGAGAGGGACGCGGGAGAGAAGGCGCCGG
CT
GCTGCCCCTGAGAACAAGGCTCTCAGAGCTCCGCAGAGTGGCGCCCCCCTGCCCAGTTCAGGCAATGA
G
CAGCATTCCTCAGCCTCCATCTTTGAGCACGTGGACAGGGTTTCGAGGACCTCAGAGGCCAGCCGCCGG
GTC
CCCAGTAAGATCCAGCTGATTGCCATGCAGCCCATCCCGGCCCCTCCAGCGCAGCACCCTGTCCTGG
CC
GACCGAGTGGCAGAGACCAACAAAATCAACAAGGAGATCCAGTCAGCACTGCGCCACAAGTCGGAGAT
T
GAGCATCACCGCAACAAGATTCGCCTTCGTGCCAAACGCCGAGGCCACTACGAGTTCCCGGTGGTGGAT
GAC
CTGTCCTCTGGTGACACCAAGGAGCGACACCGAGTATACCGCAGGGCACAAATGCAGATTGACAAGA
TC
CTGGACCCCGCAGCCAGTGTGCCCTCTGTGTTCATAGAGCCCAGGAAGAGCTCACGGATGAAACGTTC
T
CCTAAGCCACGCCGGAAACACCAGGTCAACGGCTGTCCCGCTGATGCGGAGAAGGACCGACTCATCACC
ACA
GACAGTGACGGCACATACAAGCGGCCTCCCGGTGTGCACAACTCTGCCTACATCGGATGCCCGTCTG
AT
CCTGACCTCCCAGCTGATGTCCAGACACCCTCCTCTACAGAGCTGGGCAGGTATCCCGGCCTGCCCTT
C
TCAGCCTCTCAGTACATCCCGCCTCAGCCGTCCATCGAGGAGGCACGCCAGACCATGCACTCCCTCCTG
GAT
GACGCCTTTGCCCTCGTGGCTCCCAGCAGCCAGCCCACCAATGCTATGGGAGCGGGTACTGGTGTGC
CT
GCCAGCCTACCTGTGAATAGCACCCCGTCCAGGGAAGAGAGGCGAGCCACGCAGTGGGGGTCCTTCTA
C
AGTCCAGCTCAGACGGCCAACAACCCTTGCAGCAGATACGAGGACTATGGGATGACTCCCCCATCGGGC
CCA
TTGCCAAGCAGACCTAGCTTTGGCCCAGGGTTGCTGCCGTCTTCAGAGTTGGTTCCCCCTGAACCCC
CA
CAGCCACAGTCATCAACTGATGCTCCATATGCTGCCCGAGGGATCTACTCAGAGGAGATGCCATCAGT
G
GCCCGGCCTCGGCCTGTTGGGGGCACCACAGGCTCCCAGATCCAGCATCTGACACAGGTGGGGATTGCA
AGC
AGAATCGGGGCCCAGCCAGTGGAGATTCCTGCCGGCAGAGGCAGCCAGTACGGGGGACCAGGCTGGC
CT
GTGTACGGGGAGGAGGAGGCAGGGCGAAGAGAAGCCACCCACATGCTCGGACATCAAGAGTATTCTTC
T
TCACCGCTGTTTCAGGTGCCAAGGACTTCGGGCAGGGAGCCCTCAGCCCCTCCCGGGAACCTCGCCCAC
CGA
GGGCTGCAGGGCCCTGGGCTGGGTTACCCCACCAGCTCCACAGAGGACCTCCAGCCCGGCCACTCCT
CC
GCCTCCCTCATCAAAGCGATCCGCGAGGAGCTCCTGCGGCTCTCTCAGAAACAGGGCTCAGTACAGAA
C
TTCCACAGCTGA


Translation (1940 aa):
MEREPRARVALVPERCGRGPSSRHRRPGLLLPGLWLLLLAGPASCAPDDLSLAQHSHPVRPSDFLPERSI
L
HSAAQVTLSETVPRSQPSISALVLSSPSATAFDTAFLSQRQQTQSTAEPSFFEANYGSVTSNEVALDDE
E
MDNFLPDAHWTSSRGVSPMRYITPSPPEPPQEMLEPGTTPSLPTISLPDEVLSGCQNTVQQATVYVEPS
T
YFGTSWSAFLTSEGIIPTPSRNSVLHPIEIHSQLSSKALPETVASVTEGAENLLFSSRISVSQPSGNGM
T
QQPSVPLWEVSQPLVGVLATSSDRYPNETTAWIEHPEEAIALRAHPGITTSPTDPTFSSQPSALFSTPL
S
SVSFATQLPGVSEDSFLSSEARGALESWHSSPVPSFTDHPYVLSPESSLRPHTGCVSCVVSSFQQELAR
S
LTEKDMGSGDRLETLSTASVEASHVSPLSSVGTDLSELEEPQEFNTLFPSRPVFSFSSRPVGLWKASMD
V
SPEVDVSGIAITQVYPSHGRLSTPSSLDSTFGFSVTSDLVMSSSMIHLLSSVIPSTHFDSSFSLTANQN
S
PSFPAGKPSLLTSPSLVPSAQSSAFSHGAPTSSLELQSGSRLDFTSGFYSTPPLDFSTPAPSRSDELAF
P
SLMSSDPSTFFSQTFSTMAETFSLSNSMNLQSPQLSVLNPTSLEPSQPQSSADLLLNTVTVLPSPPERP
P
LSSSPSDSLEFTEVSRVSLRESHVHLTSAFSETTSAFEFSPIPHESTISTLVPSSSEPSLGIYAAGTHL
T
SLPTTVFHLTPILTESSPFSTLTPSDGSVRVTDHHTPVLPTPSSVIPSSTESISDPYLSASSSLVSEVS
P
SPPPTKPVMGSSLTSTDFPPSTSPELSTSLELSMPSASTAPGDTVDSALNSEPMSQNPQGNSVPPPQPS
L
GPATTSTLEATVGTPALATAKPPYVCDITVPDVYLITT
VLARRAVQEYIITSIKEVLRIHFNRAVELKV
Y
ELFTDFTFLVTSGPFVYTAISVINVLINSKLVRGQTPLILSVKPSFLVPDPRFQVQT
VLQFVPPSVDTG
F
CNFTQSIEKGLVTALFEVRKHQGTYNLTVQ
IVNVTIASSRVAPRRGPVNIIFAVKGSQGFLNGSEVSDL
L
RNLTVVEFSFYLGYPVLQIAE
PFQYPQLNLSQLLKSSWVRTVLLGVVEKQLHNEVFPAEMERKLAQLLS
E
VPTRRRVWRRATVAAGNSVVQ
VVNVSRLEGDDNPVQLIYFVENQDGERLSAVKSSDLINKVDLQRAAII
L
GYRIQGVIAQ
PVDRVKRPSPESQSNNLWVVVGVVIPVLVVTVIVVILYWKLCRTDKLDFQPDTVANIQQ
R
QK
LQIPSVKGFDFAKQHLGQHNKDDILIIHEPAPLPGPVKDHTTPSENGDVPSPKSKLPSKNIRLRGRV
S
PSDADSTVSEESSERDAGEKAPAAAPENKALRAPQS
GAPLPSSGNEQHSSASIFEHVDRVSRTSEASRR
V
PSKIQLIAMQPIPAPPAQHPVLADRVAETNKINKE
IQSALRHKSEIEHHRNKIRLRAKRRGHYEFPVVD
D
LSSGDTKERHRVYRRAQMQIDKILDPAASVPSVFIEPRK
SSRMKRSPKPRRKHQVNGCPADAEKDRLIT
T
DSDGTYKRPPGVHNSAYIGCP
SDPDLPADVQTPSSTELGRYPGLPFSASQYIPPQPSIEEARQTMHSLL
D
DAFALVAPSSQPTNAMGAGTGVPASLPVNSTPSREERRATQWGSFYSPAQTANNPCS
RYEDYGMTPPSG
P
LP
SRPSFGPGLLPSSELVPPEPPQPQSSTDAPYAARGIYSEEMPSVARPRPVGGTTGSQIQHLTQVGIA
S
RIGAQPVEIPAGRGSQYGGPGWPVYGEEEAGRREA
THMLGHQEYSSSPLFQVPRTSGREPSAPPGNLAH
R
GLQGPGLGYPTSSTEDLQPGHSSASLIKAIREELLRLSQKQGSVQNFHS




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser