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Report for CCDS53128.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
53128.1 |
Public |
Mus musculus |
X |
Il1rapl1 |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 53128.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000078875.7 |
ENSMUSP00000077915.1 |
Accepted |
alive |
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EBI |
ENSMUST00000113966.7 |
ENSMUSP00000109599.1 |
Accepted |
alive |
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NCBI |
NM_001160403.2 |
NP_001153875.1 |
Accepted |
alive |
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Chromosomal Locations for CCDS 53128.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2091 nt): ATGAAAGCTCCGATCCCACATTTGATTCTCTTATATGCTACTTTCACTCAGAGTCTGAAGGTTGTGACTA AAAGAGGTTCTGCTGATGGATGCACAGATTGGTCTGTTGATATCAAGAAGTACCAAGTTTTGGTGGGAGA ACCTGTTAGAATCAAGTGTGCACTCTTTTATGGTTATATAAGAACAAACTACTCGCTCGCCCAAAGTGCT GGACTCAGCTTAATGTGGTATAAAAGCTCTGGTCCAGGAGATTTTGAAGAGCCTATCGCCTTTGATGGAA GTAGAATGAGCAAAGAGGAAGATTCCATTTGGTTCAGACCAACATTACTACAGGACAGTGGGCTTTATGC CTGTGTCATCAGGAATTCCACATACTGTATGAAAGTCTCCATCTCACTGACAGTGGGAGAAAATGACACT GGACTTTGCTACAATTCCAAGATGAAGTACTTTGAAAAAGCTGAACTTAGCAAAAGCAAGGAAATTTCAT GCCGAGACATAGAGGACTTTTTATTACCAACCAGGGAACCTGAAATCCTTTGGTACAAGGAATGTAGAAC AAAAGCATGGAGACCAAGTATTGTCTTCAAAAGAGATACCTTGCTTATAAAAGAAGTCAAAGAAGATGAC ATTGGAAACTATACCTGTGAATTAAAATACGGAGGCTTTGTTGTGAGAAGAACGACTGAGTTAACTGTTA CAGCTCCTCTAACTGATAAGCCACCTAAGCTTTTGTATCCCATGGAAAGTAAACTGACAGTTCAGGAGAC TCAACTAGGTGGCTCAGCCAACCTCACCTGCAGAGCTTTCTTTGGGTACAGTGGAGATGTCAGTCCTTTA ATTTACTGGATGAAAGGAGAGAAATTTATTGAAGATCTGGATGAAAATAGAGTTTGGGAAAGTGACATTA GAATCCTTAAGGAACATCTTGGAGAACAGGAAGTTTCTATTTCATTAATTGTTGACTCCGTGGAAGAAGG TGACCTGGGGAACTATTCCTGTTATGTTGAAAATGGAAACGGACGTCGGCATGCCAGTGTTCTCCTTCAT AAACGAGAGTTAATGTACACCGTTGAACTTGCTGGAGGGCTTGGCGCTATTCTCTTGCTGCTCATCTGTT CGGTGACCATATATAAATGTTACAAGATAGAAATCATGCTCTTCTACAGGAATCATTTTGGAGCTGAGGA ACTGGATGGAGATAACAAAGATTATGATGCCTATCTGTCATATACCAAAGTGGATCCTGACCAGTGGAAT CAAGAGACTGGGGAAGAAGAACGTTTTGCCCTTGAAATCCTCCCTGATATGCTTGAAAAGCATTATGGAT ATAAGTTGTTTATACCAGATAGAGATCTGATCCCAACTGGAACATACATTGAAGATGTGGCTAGATGCGT AGATCAAAGTAAGCGGCTGATTATTGTCATGACCCCAAATTATGTAGTTCGAAGGGGCTGGAGCATCTTT GAGCTGGAAACGAGACTTCGAAACATGCTTGTGACTGGAGAAATTAAAGTGATACTGATTGAATGCAGCG AACTCCGAGGAATTATGAACTACCAGGAGGTGGAGGCCCTCAAGCATACCATCAAGCTTCTGACGGTTAT TAAATGGCATGGACCAAAATGCAACAAGTTGAACTCGAAGTTCTGGAAACGTTTACAGTACGAAATGCCT TTTAAGAGGATAGAACCCATTACACATGAGCAGGCTTTAGATGTCAGTGAGCAGGGGCCTTTTGGGGAGC TGCAGACTGTCTCGGCCATTTCAATGGCTGCAGCCACCTCCACAGCTCTAGCCACTGCCCATCCAGATCT CCGTTCTACCTTTCATAACACCTACCATTCACAAATGCGTCAGAAACACTACTATCGAAGCTATGAGTAC GACGTACCTCCTACGGGCACCCTGCCACTTACCTCCATAGGAAATCAGCATACCTACTGTAACATCCCTA TGACACTCATCAATGGGCAGCGGCCACAGACAAAGTCGAACAGGGAGCCGAATCCAGACGAAGCCCACAC AAACAGTGCCATCCTGCCGTTGTTGCCAAGGGAGACCAGTATATCCAGTGTGATCTGGTGA
Translation (696 aa): MKAPIPHLILLYATFTQSLKVVTKRGSADGCTDWSVDIKKYQVLVGEPVRIKCALFYGYIRTNYSLAQSA GLSLMWYKSSGPGDFEEPIAFDGSRMSKEEDSIWFRPTLLQDSGLYACVIRNSTYCMKVSISLTVGENDT GLCYNSKMKYFEKAELSKSKEISCRDIEDFLLPTREPEILWYKECRTKAWRPSIVFKRDTLLIKEVKEDD IGNYTCELKYGGFVVRRTTELTVTAPLTDKPPKLLYPMESKLTVQETQLGGSANLTCRAFFGYSGDVSPL IYWMKGEKFIEDLDENRVWESDIRILKEHLGEQEVSISLIVDSVEEGDLGNYSCYVENGNGRRHASVLLH KRELMYTVELAGGLGAILLLLICSVTIYKCYKIEIMLFYRNHFGAEELDGDNKDYDAYLSYTKVDPDQWN QETGEEERFALEILPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIVMTPNYVVRRGWSIF ELETRLRNMLVTGEIKVILIECSELRGIMNYQEVEALKHTIKLLTVIKWHGPKCNKLNSKFWKRLQYEMP FKRIEPITHEQALDVSEQGPFGELQTVSAISMAAATSTALATAHPDLRSTFHNTYHSQMRQKHYYRSYEY DVPPTGTLPLTSIGNQHTYCNIPMTLINGQRPQTKSNREPNPDEAHTNSAILPLLPRETSISSVIW
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