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Report for CCDS55672.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55672.1 Public Homo sapiens 1 ASPM 24 110 108 CCDS HistoryNCBI Gene:259266Re-query CCDS DB by CCDS ID:55672.1Re-query CCDS DB by GeneID:259266See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55672.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000294732.11 ENSP00000294732.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000294732.11Link to Ensembl Protein Viewer:ENSP00000294732.7Re-query CCDS DB by Nucleotide ID:ENST00000294732Re-query CCDS DB by Protein ID:ENSP00000294732
Original member Current member NCBI NM_001206846.2 NP_001193775.1 Accepted alive Link to Nucleotide Sequence:NM_001206846.2Link to Protein Sequence:NP_001193775.1Re-query CCDS DB by Nucleotide ID:NM_001206846Re-query CCDS DB by Protein ID:NP_001193775Link to BLAST:NP_001193775.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193775.1 1892 Q8IZT6-2 1892 100% 0 0

Chromosomal Locations for CCDS 55672.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 197084324 197084426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197086803 197086972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197088256 197088432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197089930 197090084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197090196 197090388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197090850 197091041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197091907 197092056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197093052 197093261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197094084 197094180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197095998 197096164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197117789 197117983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197121915 197122043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197122159 197122301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197122388 197122595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197124110 197124331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197124870 197124955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197125046 197125191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197128490 197128665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197129187 197129317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197129915 197130056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197132285 197132352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197133350 197133595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197135096 197135242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197139767 197139871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197142331 197143810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197143957 197144100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 197146141 197146437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5679 nt):
ATGGCGAACCGGCGAGTGGGGCGAGGCTGCTGGGAAGTGAGCCCGACCGAGCGGAGGCCGCCCGCGGGGC
TGCGGGGCCCCGCGGCCGAGGAGGAGGCGTCTTCCCCGCCGGTCCTGTCTCTCAGCCACTTCTGCAGGTC
TCCTTTCCTTTGCTTCGGGGACGTTCTCCTGGGAGCCTCACGGACGCTGTCTCTGGCCCTAGACAACCCT
AACGAGGAGGTGGCAGAAGTGAAGATCTCCCACTTCCCGGCCGCGGACCTGGGCTTCAGTGTGTCGCAGC
GCTGTTTCGTGTTGCAGCCTAAAGAGAAAATTGTTATTTCTGTTAACTGGACACCACTCAAAGAAGGCCG
AGTAAGAGAGATTATGACATTTCTTGTAAATGATGTTCTGAAACACCAAGCTATATTACTAGGAAATGCA
GAAGAGCAGAAAAAGAAAAAGAGGAGTCTTTGGGATACCATTAAAAAGAAGAAAATTTCAGCCTCTACAA
GTCACAACAGAAGGGTTTCAAATATTCAGAATGTTAATAAAACATTTAGTGTTTCCCAAAAAGTTGACAG
AGTTAGGAGCCCACTACAAGCTTGTGAAAACTTGGCTATGAATGAAGGCGGTCCCCCAACAGAAAACAAT
TCTTTAATACTTGAAGAAAATAAAATACCCATATCACCTATTAGCCCTGCTTTCAATGAATGCCATGGTG
CAACTTGCTTGCCACTCTCTGTACGTCGATCTACTACCTACTCATCTCTTCATGCATCAGAAAATAGGGA
ACTATTAAATGTACACAGTGCCAACGTTTCAAAAGTTTCTTTTAATGAGAAAGCTGTAACTGAAACTTCC
TTTAATTCCGTAAATGTTAATGGCCAAAGAGGAGAGAATAGTAAACTTAGTCTTACCCCCAACTGTTCTT
CAACTTTGAACATTACACAAAGCCAAATACATTTTCTAAGTCCAGATTCTTTTGTAAATAATAGTCATGG
AGCTAATAATGAACTAGAATTAGTAACATGTCTTTCATCAGATATGTTTATGAAAGATAATTCACAGCCT
GTGCATTTGGAATCAACAATTGCACATGAAATTTATCAGAAAATTTTAAGTCCAGATTCTTTCATAAAAG
ATAATTATGGACTAAATCAGGATCTAGAATCAGAGTCAGTTAATCCTATTTTATCCCCTAATCAATTTTT
AAAAGATAACATGGCATATATGTGTACATCTCAGCAAACATGTAAAGTACCATTATCAAATGAAAATTCT
CAAGTCCCACAGTCTCCTGAAGATTGGAGAAAAAGTGAAGTTTCGCCACGTATTCCTGAATGTCAGGGTT
CAAAATCTCCCAAAGCTATTTTTGAAGAACTAGTAGAAATGAAGTCAAATTACTACAGTTTTATAAAACA
AAATAATCCTAAATTTTCTGCAGTTCAGGATATTTCTAGTCATAGCCACAATAAACAACCTAAGAGACGT
CCAATACTTTCTGCCACTGTTACTAAAAGGAAGGCCACCTGTACCAGAGAAAACCAAACTGAGATTAATA
AACCAAAAGCAAAAAGATGTCTCAACAGTGCAGTGGGTGAACATGAAAAAGTAATAAATAATCAAAAGGA
AAAAGAAGATTTTCATTCTTATCTTCCAATTATAGATCCAATATTAAGTAAATCTAAGAGTTATAAAAAC
GAGGTAACACCCTCTTCGACAACAGCTTCAGTTGCTCGGAAAAGAAAGAGCGATGGAAGCATGGAAGATG
CAAATGTGAGAGTTGCAATTACAGAACATACAGAAGTGCGAGAAATCAAAAGAATCCATTTTTCTCCCTC
AGAGCCTAAAACATCAGCTGTTAAGAAAACAAAAAATGTGACAACACCCATCTCAAAACGTATTAGCAAC
AGAGAGAAATTAAACCTGAAGAAGAAAACTGATTTATCAATATTCAGAACTCCAATTTCTAAAACAAACA
AAAGGACAAAACCCATTATCGCTGTGGCACAGTCCAGTTTGACCTTCATAAAACCATTAAAAACAGATAT
TCCCAGACACCCGATGCCATTTGCTGCAAAAAACATGTTTTATGATGAACGCTGGAAGGAAAAGCAGGAA
CAGGGCTTCACTTGGTGGTTAAATTTTATATTAACCCCTGATGACTTCACTGTAAAAACAAATATTTCTG
AAGTAAATGCTGCTACTCTTCTTTTGGGAATAGAGAATCAACATAAAATAAGTGTTCCTAGAGCACCTAC
AAAAGAGGAAATGTCTCTCAGAGCTTATACTGCTCGGTGTAGGTTAAACAGACTACGTCGTGCAGCATGC
CGTTTGTTTACTTCTGAAAAAATGGTTAAAGCTATTAAAAAGCTTGAAATTGAAATTGAAGCTAGGCGGT
TAATTGTTCGAAAAGATAGACACCTATGGAAAGATGTGGGAGAACGTCAGAAAGTCCTGAATTGGCTGTT
GTCCTACAATCCTTTGTGGCTTCGAATTGGTCTAGAGACAACTTATGGAGAACTCATATCTTTGGAAGAT
AACAGTGATGTCACAGGGTTGGCTATGTTTATTCTGAATCGCCTACTTTGGAATCCTGATATAGCAGCTG
AGTATAGACACCCCACTGTTCCTCACCTGTATAGAGATGGTCATGAAGAAGCTTTGTCCAAGTTTACATT
GAAAAAGTTATTGTTGTTGGTCTGTTTTCTTGATTATGCTAAAATTTCCAGACTCATTGATCATGATCCT
TGTCTCTTCTGTAAAGATGCCGAATTCAAGGCTAGTAAAGAAATCCTTTTGGCTTTTTCACGAGATTTCC
TAAGTGGTGAAGGTGACCTTTCCCGTCACCTTGGCTTATTGGGATTACCTGTTAACCATGTTCAGACACC
ATTTGATGAATTTGATTTTGCCGTTACAAATCTTGCCGTAGACTTGCAATGTGGAGTGCGCCTTGTGCGA
ACCATGGAACTTCTCACACAGAACTGGGACCTCTCAAAGAAACTCAGGATTCCGGCAATAAGTCGTCTTC
AAAAGATGCACAATGTTGACATTGTTCTTCAAGTTCTTAAATCACGAGGAATTGAATTAAGTGATGAGCA
TGGAAATACAATTCTATCTAAGGATATTGTGGATAGGCACAGAGAAAAAACTCTCAGGTTGCTTTGGAAA
ATAGCGTTTGCTTTTCAGGTGGATATTTCCCTTAACTTAGATCAATTAAAGGAAGAAATTGCCTTTCTAA
AACACACAAAGAGTATAAAGAAAACAATATCTCTACTATCATGCCATTCTGATGATCTTATTAATAAGAA
AAAAGGCAAAAGGGATAGTGGTTCCTTTGAACAATATAGTGAAAACATAAAGTTATTGATGGATTGGGTA
AATGCTGTTTGTGCCTTCTATAATAAAAAGGTGGAGAATTTTACAGTGTCTTTCTCAGACGGCCGTGTGT
TATGTTACCTGATCCACCATTACCATCCTTGCTATGTGCCATTTGACGCTATATGTCAGCGTACTACTCA
AACTGTGGAATGTACGCAAACTGGTTCAGTGGTATTAAATTCATCATCTGAATCTGATGACAGTTCTCTG
GATATGTCTCTTAAAGCATTTGATCATGAAAATACTTCAGAGCTATACAAAGAGCTCCTAGAAAATGAAA
AGAAAAATTTTCACTTGGTTAGGTCTGCAGTTAGAGACCTTGGTGGAATACCTGCTATGATTAATCATTC
AGATATGTCAAATACAATTCCAGATGAAAAGGTGGTTATTACCTATTTGTCATTTCTTTGTGCAAGGCTT
TTGGATCTTCGTAAAGAAATAAGAGCTGCTCGACTCATACAAACAACATGGAGAAAATATAAACTAAAAA
CAGATCTCAAACGCCATCAGGAGAGAGAGAAAGCTGCAAGAATTATTCAATTGGCTGTAATCAATTTTCT
AGCAAAACAAAGATTGAGAAAAAGAGTTAATGCAGCACTCGTCATTCAGAAATATTGGCGAAGAGTCTTA
GCACAGAGAAAATTATTAATGTTAAAAAAGGAAAAGCTGGAAAAAGTTCAAAATAAAGCAGCATCACTTA
TTCAGGCTATGTGGAGGAGATATAGAGCCAAGAAATATTTATGTAAAGTGAAAGCTGCCTGCAAGATTCA
AGCCTGGTATAGATGTTGGAGAGCACACAAAGAATATCTAGCTATATTAAAAGCTGTTAAAATTATTCAA
GGTTGCTTCTATACCAAACTAGAGAGAACACGGTTTTTGAATGTGAGAGCATCAGCAATTATCATTCAGA
GAAAATGGAGAGCTATACTTCCTGCAAAGATAGCTCATGAACACTTCTTAATGATAAAAAGACATCGAGC
TGCTTGTTTGATCCAAGCACATTATAGAGGATATAAAGGAAGGCAGGTCTTTCTTCGGCAGAAATCTGCT
GCTTTGATCATACAAAAATATATACGAGCCAGGGAGGCTGGAAAGCATGAAAGGATAAAATATATTGAAT
TTAAAAAATCTACAGTTATCCTACAAGCACTGGTGCGTGGTTGGCTAGTACGAAAAAGATTTTTAGAACA
GAGAGCCAAAATTCGACTTCTTCACTTCACTGCAGCTGCATATTATCACCTGAATGCTGTTAGAATTCAA
AGAGCCTATAAACTTTACCTGGCTGTGAAGAATGCTAACAAGCAGGTTAATTCAGTCATCTGTATTCAGA
GATGGTTTCGAGCAAGATTACAAGAAAAGAGATTTATTCAGAAATATCATAGCATCAAAAAGATTGAGCA
TGAAGGTCAAGAATGTCTGAGCCAGCGAAATAGGGCTGCATCAGTAATACAGAAAGCAGTGCGCCATTTT
CTCCTCCGTAAAAAGCAGGAAAAATTCACTAGTGGAATCATTAAAATTCAGGCATTATGGAGAGGCTATT
CTTGGAGGAAGAAAAATGATTGTACAAAAATTAAAGCTATACGACTAAGTCTTCAAGTTGTTAATAGGGA
GATTCGAGAAGAAAACAAACTCTACAAAAGAACTGCACTTGCACTTCATTACCTTTTGACATATAAGCAC
CTTTCTGCCATTCTTGAGGCCTTAAAACACCTAGAGGTAGTTACTAGATTGTCTCCACTTTGTTGTGAGA
ACATGGCCCAGAGTGGAGCAATTTCTAAAATATTTGTTTTGATCCGAAGTTGTAATCGCAGTATTCCTTG
TATGGAAGTCATCAGATATGCTGTGCAAGTCTTGCTTAATGTATCTAAGTATGAGAAAACTACTTCAGCA
GTTTATGATGTAGAAAATTGTATAGATATACTATTGGAGCTTTTGCAGATATACCGAGAAAAGCCTGGTA
ATAAAGTTGCAGACAAAGGCGGAAGCATTTTTACAAAAACTTGTTGTTTGTTGGCTATTTTACTGAAGAC
AACAAATAGAGCCTCTGATGTACGAAGTAGGTCCAAAGTTGTTGACCGTATTTACAGTCTCTACAAACTT
ACAGCTCATAAACATAAAATGAATACTGAAAGAATACTTTACAAGCAAAAGAAGAATTCTTCTATAAGCA
TTCCTTTTATCCCAGAAACACCTGTAAGGACCAGAATAGTTTCAAGACTTAAGCCAGATTGGGTTTTGAG
AAGAGATAACATGGAAGAAATCACAAATCCCCTGCAAGCTATTCAAATGGTGATGGATACGCTTGGCATT
CCTTATTAG

Translation (1892 aa):
MANRRVGRGCWEVSPTERRPPAGLRGPAAEEEASSPPVLSLSHFCRSPFLCFGDVLLGASRTLSLALDNP
NEEVAEVKISHFPAADLGFSVSQRCFVLQPKEKIVISVNWTPLKEGRVREIMTFLVNDVLKHQAILLGNA
EEQKKKKRSLWDTIKKKKISASTSHNRRVSNIQNVNKTFSVSQKVDRVRSPLQACENLAMNEGGPPTENN
SLILEENKIPISPISPAFNECHGATCLPLSVRRSTTYSSLHASENRELLNVHSANVSKVSFNEKAVTETS
FNSVNVNGQRGENSKLSLTPNCSSTLNITQSQIHFLSPDSFVNNSHGANNELELVTCLSSDMFMKDNSQP
VHLESTIAHEIYQKILSPDSFIKDNYGLNQDLESESVNPILSPNQFLKDNMAYMCTSQQTCKVPLSNENS
QVPQSPEDWRKSEVSPRIPECQGSKSPKAIFEELVEMKSNYYSFIKQNNPKFSAVQDISSHSHNKQPKRR
PILSATVTKRKATCTRENQTEINKPKAKRCLNSAVGEHEKVINNQKEKEDFHSYLPIIDPILSKSKSYKN
EVTPSSTTASVARKRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISN
REKLNLKKKTDLSIFRTPISKTNKRTKPIIAVAQSSLTFIKPLKTDIPRHPMPFAAKNMFYDERWKEKQE
QGFTWWLNFILTPDDFTVKTNISEVNAATLLLGIENQHKISVPRAPTKEEMSLRAYTARCRLNRLRRAAC
RLFTSEKMVKAIKKLEIEIEARRLIVRKDRHLWKDVGERQKVLNWLLSYNPLWLRIGLETTYGELISLED
NSDVTGLAMFILNRLLWNPDIAAEYRHPTVPHLYRDGHEEALSKFTLKKLLLLVCFLDYAKISRLIDHDP
CLFCKDAEFKASKEILLAFSRDFLSGEGDLSRHLGLLGLPVNHVQTPFDEFDFAVTNLAVDLQCGVRLVR
TMELLTQNWDLSKKLRIPAISRLQKMHNVDIVLQVLKSRGIELSDEHGNTILSKDIVDRHREKTLRLLWK
IAFAFQVDISLNLDQLKEEIAFLKHTKSIKKTISLLSCHSDDLINKKKGKRDSGSFEQYSENIKLLMDWV
NAVCAFYNKKVENFTVSFSDGRVLCYLIHHYHPCYVPFDAICQRTTQTVECTQTGSVVLNSSSESDDSSL
DMSLKAFDHENTSELYKELLENEKKNFHLVRSAVRDLGGIPAMINHSDMSNTIPDEKVVITYLSFLCARL
LDLRKEIRAARLIQTTWRKYKLKTDLKRHQEREKAARIIQLAVINFLAKQRLRKRVNAALVIQKYWRRVL
AQRKLLMLKKEKLEKVQNKAASLIQAMWRRYRAKKYLCKVKAACKIQAWYRCWRAHKEYLAILKAVKIIQ
GCFYTKLERTRFLNVRASAIIIQRKWRAILPAKIAHEHFLMIKRHRAACLIQAHYRGYKGRQVFLRQKSA
ALIIQKYIRAREAGKHERIKYIEFKKSTVILQALVRGWLVRKRFLEQRAKIRLLHFTAAAYYHLNAVRIQ
RAYKLYLAVKNANKQVNSVICIQRWFRARLQEKRFIQKYHSIKKIEHEGQECLSQRNRAASVIQKAVRHF
LLRKKQEKFTSGIIKIQALWRGYSWRKKNDCTKIKAIRLSLQVVNREIREENKLYKRTALALHYLLTYKH
LSAILEALKHLEVVTRLSPLCCENMAQSGAISKIFVLIRSCNRSIPCMEVIRYAVQVLLNVSKYEKTTSA
VYDVENCIDILLELLQIYREKPGNKVADKGGSIFTKTCCLLAILLKTTNRASDVRSRSKVVDRIYSLYKL
TAHKHKMNTERILYKQKKNSSISIPFIPETPVRTRIVSRLKPDWVLRRDNMEEITNPLQAIQMVMDTLGI
PY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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