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Report for CCDS14774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14774.1 Public Homo sapiens Y ZFY 24 110 108 CCDS HistoryNCBI Gene:7544Re-query CCDS DB by CCDS ID:14774.1Re-query CCDS DB by GeneID:7544See the combined annotation on chromosome Y in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14774.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000155093.8 ENSP00000155093.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000155093.8Link to Ensembl Protein Viewer:ENSP00000155093.3Re-query CCDS DB by Nucleotide ID:ENST00000155093Re-query CCDS DB by Protein ID:ENSP00000155093
Original member Current member EBI ENST00000383052.5 ENSP00000372525.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000383052.5Link to Ensembl Protein Viewer:ENSP00000372525.1Re-query CCDS DB by Nucleotide ID:ENST00000383052Re-query CCDS DB by Protein ID:ENSP00000372525
Original member Current member NCBI NM_001369702.1 NP_001356631.1 Accepted alive Link to Nucleotide Sequence:NM_001369702.1Link to Protein Sequence:NP_001356631.1Re-query CCDS DB by Nucleotide ID:NM_001369702Re-query CCDS DB by Protein ID:NP_001356631Link to BLAST:NP_001356631.1
Original member Current member NCBI NM_003411.4 NP_003402.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003411.4Link to Protein Sequence:NP_003402.2Re-query CCDS DB by Nucleotide ID:NM_003411Re-query CCDS DB by Protein ID:NP_003402Link to BLAST:NP_003402.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001356631.1 801 P08048-1 801 100% 0 0
NP_003402.2 801 P08048-1 801 100% 0 0

Chromosomal Locations for CCDS 14774.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome Y (NC_000024.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome YSee the combined annotation on chromosome Y in Sequence Viewer

Chromosome Start Stop Links
Y 2953937 2953997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 2961074 2961646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 2975095 2975244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 2975511 2975654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 2976670 2976822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 2977940 2978080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 2978810 2979993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2406 nt):
ATGGATGAAGATGAATTTGAATTGCAGCCACAAGAGCCAAACTCATTTTTTGATGGAATAGGAGCTGATG
CTACACACATGGATGGTGATCAGATTGTTGTGGAAATACAAGAAGCAGTTTTTGTTTCTAATATTGTGGA
TTCTGACATAACTGTGCATAACTTTGTTCCTGATGACCCAGACTCAGTTGTAATCCAAGATGTTGTTGAA
GATGTTGTCATAGAGGAGGATGTTCAGTGCTCAGATATCTTAGAAGAGGCAGATGTATCTGAAAATGTCA
TCATTCCTGAGCAAGTGCTGGACTCAGATGTAACTGAAGAAGTTTCTTTACCACACTGCACAGTCCCAGA
TGATGTTTTAGCTTCTGACATTACTTCAACCTCAATGTCTATGCCAGAACATGTTTTAACGAGTGAATCC
ATGCATGTGTGTGACATTGGACATGTTGAACATATGGTGCATGATAGTGTAGTGGAAGCAGAAATCATTA
CTGATCCTCTGACGAGTGACATAGTTTCAGAAGAAGTATTGGTAGCAGACTGTGCCCCTGAAGCAGTCAT
AGATGCCAGCGGGATCTCAGTGGACCAGCAAGATAATGACAAAGCCAGCTGTGAGGACTACCTAATGATT
TCGTTGGATGATGCTGGCAAAATAGAACATGATGGTTCCACTGGAGTGACCATCGATGCAGAATCAGAAA
TGGATCCTTGTAAAGTGGATAGCACTTGTCCTGAAGTCATCAAGGTGTACATTTTTAAAGCTGACCCTGG
AGAAGATGACTTAGGTGGAACTGTAGACATTGTGGAGAGTGAACCTGAAAATGATCATGGAGTTGAACTA
CTTGATCAGAACAGCAGTATTCGTGTTCCCAGGGAAAAGATGGTTTATATGACTGTCAATGACTCTCAAC
AAGAAGATGAAGATTTAAATGTTGCTGAAATTGCTGATGAAGTTTATATGGAAGTGATCGTAGGAGAGGA
GGATGCTGCTGTTGCAGCAGCAGCAGCTGCTGTGCATGAGCAGCAAATTGATGAGGATGAAATGAAAACC
TTCGTACCAATTGCATGGGCAGCAGCTTATGGTAATAATTCTGATGGAATTGAAAACCGGAATGGCACTG
CAAGTGCCCTCTTGCACATAGATGAGTCTGCTGGCCTTGGCAGACTGGCTAAACAGAAACCAAAGAAAAA
GAGAAGACCTGATTCCAGGCAGTACCAAACAGCAATAATTATTGGCCCTGATGGTCATCCTTTGACTGTC
TATCCTTGCATGATTTGTGGGAAGAAGTTTAAGTCGAGGGGTTTTTTGAAAAGACACATGAAAAACCATC
CTGAACACCTTGCCAAGAAGAAGTACCACTGTACTGACTGTGATTACACTACCAATAAGAAGATAAGTTT
ACATAACCACCTGGAGAGCCACAAGCTGACCAGCAAGGCAGAGAAGGCCATTGAATGTGATGAGTGTGGG
AAGCATTTTTCTCATGCAGGGGCTTTGTTTACTCACAAAATGGTGCATAAGGAAAAAGGGGCCAACAAAA
TGCACAAGTGTAAATTCTGTGAATATGAGACAGCTGAACAGGGGTTATTGAATCGCCACCTCTTGGCAGT
CCACAGCAAGAACTTTCCTCATATTTGTGTGGAGTGTGGTAAAGGTTTCCGACACCCGTCGGAACTGAGA
AAGCACATGCGAATCCATACCGGCGAGAAGCCATACCAATGCCAGTACTGTGAATATAGGTCTGCAGACT
CTTCTAACTTGAAAACACATATAAAAACAAAGCATAGTAAAGAGATGCCATTCAAGTGTGACATTTGTCT
TCTGACTTTCTCAGATACCAAAGAAGTGCAGCAACATACTCTTGTCCACCAAGAAAGCAAAACACATCAG
TGTTTGCATTGCGACCACAAGAGTTCAAACTCAAGTGATTTGAAACGACATGTAATTTCAGTTCATACGA
AAGACTATCCTCATAAGTGTGAGATGTGCGAGAAAGGCTTTCACAGGCCTTCAGAACTTAAGAAACATGT
GGCTGTCCACAAAGGTAAAAAAATGCACCAATGTAGACATTGTGACTTTAAGATTGCAGACCCATTTGTT
CTAAGTCGCCATATTCTCTCAGTTCACACAAAGGATCTTCCATTTAGGTGTAAGAGATGTAGAAAGGGAT
TTAGGCAACAAAATGAGCTTAAAAAGCATATGAAGACACACAGTGGCAGGAAAGTATATCAGTGTGAGTA
CTGTGAGTATAGCACTACAGATGCCTCAGGCTTTAAACGGCACGTTATTTCCATTCATACAAAAGACTAT
CCTCATCGGTGTGAGTACTGCAAGAAAGGCTTCCGAAGACCTTCAGAAAAGAACCAGCACATAATGAGAC
ACCATAAAGAAGTTGGTCTGCCCTAA

Translation (801 aa):
MDEDEFELQPQEPNSFFDGIGADATHMDGDQIVVEIQEAVFVSNIVDSDITVHNFVPDDPDSVVIQDVVE
DVVIEEDVQCSDILEEADVSENVIIPEQVLDSDVTEEVSLPHCTVPDDVLASDITSTSMSMPEHVLTSES
MHVCDIGHVEHMVHDSVVEAEIITDPLTSDIVSEEVLVADCAPEAVIDASGISVDQQDNDKASCEDYLMI
SLDDAGKIEHDGSTGVTIDAESEMDPCKVDSTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVEL
LDQNSSIRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAVHEQQIDEDEMKT
FVPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKKRRPDSRQYQTAIIIGPDGHPLTV
YPCMICGKKFKSRGFLKRHMKNHPEHLAKKKYHCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECG
KHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELR
KHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQQHTLVHQESKTHQ
CLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFV
LSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDY
PHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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