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Report for CCDS34483.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34483.1 Public Homo sapiens 6 DPPA5 24 110 108 CCDS HistoryNCBI Gene:340168Re-query CCDS DB by CCDS ID:34483.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34483.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370370.4 ENSP00000359396.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370370.4Link to Ensembl Protein Viewer:ENSP00000359396.3Re-query CCDS DB by Nucleotide ID:ENST00000370370Re-query CCDS DB by Protein ID:ENSP00000359396
Original member Current member NCBI NM_001025290.3 NP_001020461.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001025290.3Link to Protein Sequence:NP_001020461.1Re-query CCDS DB by Nucleotide ID:NM_001025290Re-query CCDS DB by Protein ID:NP_001020461Link to BLAST:NP_001020461.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001020461.1 116 A6NC42 116 100% 0 0

Chromosomal Locations for CCDS 34483.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 73353320 73353378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 73353853 73354032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 73354114 73354225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGGGAACTCTCCCGGCACGTAGACATATCCCGCCGTGGGTGAAAGTTCCCGAAGACCTGAAAGATCCAG
AGGTGTTCCAGGTCCAGACGCGGCTGCTGAAAGCCATTTTCGGCCCGGACGGATCTCGAATCCCTTACAT
CGAGCAGGTGAGCAAGGCCATGCTCGAGCTGAAGGCTCTGGAGTCTTCAGACCTCACCGAGGTCGTGGTT
TACGGCTCCTATTTGTACAAGCTCCGGACCAAGTGGATGCTCCAGTCCATGGCTGAGTGGCACCGCCAGC
GCCAGGAGCGAGGGATGCTCAAACTTGCCGAAGCCATGAATGCCCTCGAACTAGGCCCTTGGATGAAGTG
A

Translation (116 aa):
MGTLPARRHIPPWVKVPEDLKDPEVFQVQTRLLKAIFGPDGSRIPYIEQVSKAMLELKALESSDLTEVVV
YGSYLYKLRTKWMLQSMAEWHRQRQERGMLKLAEAMNALELGPWMK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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