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Report for CCDS7992.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7992.1 Public Homo sapiens 11 MS4A10 24 110 108 CCDS HistoryNCBI Gene:341116Re-query CCDS DB by CCDS ID:7992.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7992.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308287.2 ENSP00000311862.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308287.2Link to Ensembl Protein Viewer:ENSP00000311862.1Re-query CCDS DB by Nucleotide ID:ENST00000308287Re-query CCDS DB by Protein ID:ENSP00000311862
Original member Current member NCBI NM_206893.4 NP_996776.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_206893.4Link to Protein Sequence:NP_996776.2Re-query CCDS DB by Nucleotide ID:NM_206893Re-query CCDS DB by Protein ID:NP_996776Link to BLAST:NP_996776.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996776.2 267 Q96PG2 267 100% 0 0

Chromosomal Locations for CCDS 7992.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 60790336 60790518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60790974 60791093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60792265 60792321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60793972 60794103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60795555 60795665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60798396 60798514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60799828 60799909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (804 nt):
ATGAAAGCAGAAGCCACAGTTATTCCCAGCCGTTGTGCTAGGGGGCTCCCATCATGGCAAGTCCTCAGCC
CAGTCCAGCCCTGGCAGACAAGTGCACCCCAGAACACGACCCAGCCCAAGCTCCTGGCTCCACACCAGCA
CGAGAAGTCCCAGAAGAAGAGCAGCCTTCTTAAGGAGCTGGGGGCCTTCCACATCACCATCGCTCTGCTG
CACCTGGTCTTTGGGGGCTACCTGGCCTCTATAGTCAAGAACCTTCACCTGGTGGTGCTGAAGTCTTGGT
ATCCATTCTGGGGGGCTGCCTCTTTTCTCATTTCAGGGATCTTGGCGATAACAATGAAGACCTTTTCTAA
AACTTACCTGAAGATGTTGTGCCTGATGACAAACCTCATCAGCCTCTTTTGCGTGCTGTCTGGCCTCTTC
GTCATCTCCAAGGATCTCTTTCTGGAGAGCCCATTTGAGTCCCCGATCTGGAGAATGTACCCCAACTCCA
CGGTCCACATCCAGAGGCTGGAGCTGGCCTTGCTCTGCTTCACTGTCCTAGAGCTCTTCCTGCCAGTGCC
CACAGCTGTCACAGCCTGGAGAGGGGACTGCCCATCTGCAAAGAATGATGATGCATGCCTTGTTCCGAAT
ACACCATTGCATCTCAAAGGCCTGCCGGTGGAGCCCCCGCCATCCTACCAGAGTGTGATTCAAGGCGACG
CACAACACAAGCAACATCAGAGGCTCAGAGAAGTTAAGCAAGTTGCCCCGGACACATGGATAGTCACTGA
CGGAGCTGCGATCTGGACCCAGACTGCAAACTGA

Translation (267 aa):
MKAEATVIPSRCARGLPSWQVLSPVQPWQTSAPQNTTQPKLLAPHQHEKSQKKSSLLKELGAFHITIALL
HLVFGGYLASIVKNLHLVVLKSWYPFWGAASFLISGILAITMKTFSKTYLKMLCLMTNLISLFCVLSGLF
VISKDLFLESPFESPIWRMYPNSTVHIQRLELALLCFTVLELFLPVPTAVTAWRGDCPSAKNDDACLVPN
TPLHLKGLPVEPPPSYQSVIQGDAQHKQHQRLREVKQVAPDTWIVTDGAAIWTQTAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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