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Report for CCDS32148.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32148.1 Public Homo sapiens 14 IFI27 24 110 108 CCDS HistoryNCBI Gene:3429Re-query CCDS DB by CCDS ID:32148.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 32148.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000616764.5 ENSP00000477753.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616764.5Link to Ensembl Protein Viewer:ENSP00000477753.1Re-query CCDS DB by Nucleotide ID:ENST00000616764Re-query CCDS DB by Protein ID:ENSP00000477753
Original member Current member EBI ENST00000612813.4 ENSP00000483430.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000612813.4Link to Ensembl Protein Viewer:ENSP00000483430.1Re-query CCDS DB by Nucleotide ID:ENST00000612813Re-query CCDS DB by Protein ID:ENSP00000483430
Original member Current member EBI ENST00000621160.5 ENSP00000483498.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000621160.5Link to Ensembl Protein Viewer:ENSP00000483498.1Re-query CCDS DB by Nucleotide ID:ENST00000621160Re-query CCDS DB by Protein ID:ENSP00000483498
Original member Current member NCBI NM_001366993.1 NP_001353922.1 Accepted alive Link to Nucleotide Sequence:NM_001366993.1Link to Protein Sequence:NP_001353922.1Re-query CCDS DB by Nucleotide ID:NM_001366993Re-query CCDS DB by Protein ID:NP_001353922Link to BLAST:NP_001353922.1
Original member Current member NCBI NM_001366994.1 NP_001353923.1 Accepted alive Link to Nucleotide Sequence:NM_001366994.1Link to Protein Sequence:NP_001353923.1Re-query CCDS DB by Nucleotide ID:NM_001366994Re-query CCDS DB by Protein ID:NP_001353923Link to BLAST:NP_001353923.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001353922.1 122 P40305-2 122 100% 0 0
NP_001353923.1 122 P40305-2 122 100% 0 0

Chromosomal Locations for CCDS 32148.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 94111683 94111773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94114851 94114880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94115781 94115942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94116442 94116527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (369 nt):
ATGGAGGCCTCTGCTCTCACCTCATCAGCAGTGACCAGTGTGGCCAAAGTGGTCAGGGTGGCCTCTGGCT
CTGCCGTAGTTTTGCCCCTGGCCAGGATTGCTACAGTTGTGATTGGAGGAGTTGTGGCCATGGCGGCTGT
GCCCATGGTGCTCAGTGCCATGGGCTTCACTGCGGCGGGAATCGCCTCGTCCTCCATAGCAGCCAAGATG
ATGTCCGCGGCGGCCATTGCCAATGGGGGTGGAGTTGCCTCGGGCAGCCTTGTGGCTACTCTGCAGTCAC
TGGGAGCAACTGGACTCTCCGGATTGACCAAGTTCATCCTGGGCTCCATTGGGTCTGCCATTGCGGCTGT
CATTGCGAGGTTCTACTAG

Translation (122 aa):
MEASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAMAAVPMVLSAMGFTAAGIASSSIAAKM
MSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAVIARFY


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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