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Report for CCDS58956.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58956.1 Public Homo sapiens 5 MARVELD2 24 110 108 CCDS HistoryNCBI Gene:153562Re-query CCDS DB by CCDS ID:58956.1Re-query CCDS DB by GeneID:153562See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58956.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000454295.6 ENSP00000396244.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000454295.6Link to Ensembl Protein Viewer:ENSP00000396244.2Re-query CCDS DB by Nucleotide ID:ENST00000454295Re-query CCDS DB by Protein ID:ENSP00000396244
Original member Current member EBI ENST00000647531.1 ENSP00000493858.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000647531.1Link to Ensembl Protein Viewer:ENSP00000493858.1Re-query CCDS DB by Nucleotide ID:ENST00000647531Re-query CCDS DB by Protein ID:ENSP00000493858
Original member Current member NCBI NM_001244734.2 NP_001231663.1 Accepted alive Link to Nucleotide Sequence:NM_001244734.2Link to Protein Sequence:NP_001231663.1Re-query CCDS DB by Nucleotide ID:NM_001244734Re-query CCDS DB by Protein ID:NP_001231663Link to BLAST:NP_001231663.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001231663.1 546 Q8N4S9-3 546 100% 0 0

Chromosomal Locations for CCDS 58956.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 69419386 69420531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 69432527 69432675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 69432922 69433093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 69440450 69440500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 69441532 69441654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1641 nt):
ATGTCAAATGATGGAAGATCCAGGAATCGGGACAGGCGCTACGATGAGGTCCCAAGCGACCTGCCCTATC
AAGATACCACCATAAGAACCCACCCAACTCTTCATGACAGTGAGCGGGCAGTGAGCGCTGATCCCTTGCC
ACCACCCCCTCTCCCATTACAGCCACCATTCGGCCCAGACTTCTACTCAAGTGACACAGAAGAACCAGCT
ATAGCGCCAGATCTCAAACCAGTAAGGCGCTTTGTCCCTGACTCCTGGAAGAACTTTTTCAGAGGGAAGA
AAAAGGACCCCGAATGGGATAAGCCGGTGTCTGATATCAGGTACATCTCCGATGGAGTGGAGTGTTCACC
ACCAGCCTCTCCAGCAAGACCAAACCACCGTTCGCCCCTCAACTCCTGCAAAGATCCCTACGGAGGGTCA
GAAGGAACCTTTAGTTCCCGGAAAGAGGCTGACGCAGTGTTTCCCCGGGATCCCTATGGATCTCTAGACC
GACACACACAAACAGTTCGAACATACAGTGAGAAGGTGGAGGAGTATAACCTGAGATACTCCTACATGAA
GTCGTGGGCAGGCCTGCTGAGAATACTGGGTGTGGTGGAGCTGCTTTTGGGGGCCGGTGTCTTTGCTTGT
GTCACAGCTTACATTCACAAGGACAGTGAGTGGTACAACTTGTTTGGATATTCACAACCGTATGGCATGG
GAGGCGTTGGTGGATTGGGCAGTATGTATGGGGGCTATTACTACACTGGCCCTAAGACCCCTTTTGTACT
CGTGGTTGCTGGATTAGCTTGGATCACCACCATTATTATTCTGGTTCTTGGCATGTCCATGTATTACCGG
ACCATTCTTCTGGACTCTAATTGGTGGCCCCTAACTGAATTTGGAATTAACGTTGCCTTGTTTATTTTGT
ATATGGCCGCAGCCATAGTCTATGTGAATGATACCAACCGAGGTGGCCTCTGCTACTATCCGTTATTTAA
TACACCAGTGAATGCAGTGTTCTGCCGGGTAGAAGGAGGACAGATAGCTGCAATGATCTTCCTGTTTGTC
ACCATGATAGTTTATCTCATTAGTGCTTTGGTTTGCCTAAAGTTATGGAGGCATGAGGCAGCTCGGAGAC
ATAGAGAATATATGGAACAACAGGAGTGTGAAATGGCCACCAGTGGTGACAGACAAAGAGACTCAGAAGT
TAATTTCAAGGAACTGAGAACAGCAAAAATGAAACCTGAACTACTGAGTGGACACATCCCCCCAGGCCAC
ATTCCTAAACCTATCGTGATGCCCGACTATGTGGCAAAATACCCTGTGATTCAGACAGATGATGAGCGAG
AACGCTATAAAGCTGTGTTCCAAGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCAGAAGTTCAGGCTGT
CCTGAGGAAGTTTGATGAGCTGGATGCAGTGATGAGCAGATTGCCACATCATTCGGAAAGCCGACAGGAA
CATGAGAGAATTTCAAGAATCCATGAAGAGTTTAAGAAAAAAAAGAATGATCCTACATTTCTGGAAAAAA
AAGAACGCTGTGATTACCTAAAGAATAAACTTTCTCACATAAAGCAAAGAATTCAAGAATATGATAAAGT
AATGAATTGGGATGTACAAGGTTATTCTTAA

Translation (546 aa):
MSNDGRSRNRDRRYDEVPSDLPYQDTTIRTHPTLHDSERAVSADPLPPPPLPLQPPFGPDFYSSDTEEPA
IAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKPVSDIRYISDGVECSPPASPARPNHRSPLNSCKDPYGGS
EGTFSSRKEADAVFPRDPYGSLDRHTQTVRTYSEKVEEYNLRYSYMKSWAGLLRILGVVELLLGAGVFAC
VTAYIHKDSEWYNLFGYSQPYGMGGVGGLGSMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGMSMYYR
TILLDSNWWPLTEFGINVALFILYMAAAIVYVNDTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFV
TMIVYLISALVCLKLWRHEAARRHREYMEQQECEMATSGDRQRDSEVNFKELRTAKMKPELLSGHIPPGH
IPKPIVMPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSRLPHHSESRQE
HERISRIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYDKVMNWDVQGYS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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