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Report for CCDS2713.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2713.1 Public Homo sapiens 3 ZNF445 24 110 108 CCDS HistoryNCBI Gene:353274Re-query CCDS DB by CCDS ID:2713.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2713.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396077.8 ENSP00000379387.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396077.8Link to Ensembl Protein Viewer:ENSP00000379387.2Re-query CCDS DB by Nucleotide ID:ENST00000396077Re-query CCDS DB by Protein ID:ENSP00000379387
Original member Current member EBI ENST00000425708.6 ENSP00000413073.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000425708.6Link to Ensembl Protein Viewer:ENSP00000413073.2Re-query CCDS DB by Nucleotide ID:ENST00000425708Re-query CCDS DB by Protein ID:ENSP00000413073
Original member Current member NCBI NM_181489.6 NP_852466.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_181489.6Link to Protein Sequence:NP_852466.1Re-query CCDS DB by Nucleotide ID:NM_181489Re-query CCDS DB by Protein ID:NP_852466Link to BLAST:NP_852466.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_852466.1 1031 P59923 1031 100% 0 0

Chromosomal Locations for CCDS 2713.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 44446575 44448739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44449513 44449623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44450447 44450573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44450868 44450962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44451314 44451482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44455121 44455549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3096 nt):
ATGCCTCCAGGCAGGTGGCATGCTGCCTATCCAGCTCAGGCCCAGTCTTCGAGGGAGCGAGGGCGGCTTC
AGACAGTAAAGAAGGAAGAAGAGGATGAAAGCTATACTCCAGTGCAGGCTGCCAGGCCACAGACTCTCAA
CCGCCCTGGCCAGGAGCTGTTCCGCCAGCTCTTCAGACAGCTTCGCTACCATGAGTCTTCAGGGCCCCTA
GAAACTCTGAGCCGGCTCCGGGAACTCTGTCGCTGGTGGCTGAGGCCTGACGTTCTCTCCAAGGCACAGA
TCCTAGAGCTGCTGGTGCTGGAACAGTTCCTGAGCATCCTGCCTGGGGAGCTCCGGGTTTGGGTGCAGCT
TCATAACCCTGAGAGTGGCGAGGAGGCTGTGGCCTTGCTGGAGGAGCTGCAGAGGGACCTTGATGGGACA
TCCTGGAGGGACCCGGGCCCTGCCCAGAGCCCAGATGTGCATTGGATGGGTACAGGAGCCCTGCGATCTG
CACAGATATGGTCCCTTGCTTCACCTCTCAGGAGCAGCTCTGCTCTGGGGGACCACCTGGAGCCTCCCTA
TGAAATAGAAGCACGTGACTTCCTGGCTGGGCAATCCGATACTCCTGCTGCCCAGATGCCTGCCCTTTTC
CCGAGAGAGGGGTGCCCGGGAGACCAGGTAACACCAACCAGGTCCCTGACAGCCCAGCTCCAGGAGACCA
TGACTTTCAAGGATGTGGAGGTGACCTTCTCCCAGGACGAGTGGGGGTGGCTGGACTCTGCTCAGAGGAA
CCTGTACAGGGATGTGATGCTGGAGAATTATAGGAACATGGCTTCCCTGGTGGGACCATTCACCAAACCT
GCTCTGATCTCCTGGTTGGAAGCAAGGGAGCCATGGGGCCTGAACATGCAGGCAGCTCAGCCTAAGGGGA
ATCCAGTTGCTGCTCCTACAGGAGATGACCTCCAGAGTAAAACAAACAAATTCATCTTAAATCAGGAACC
TTTGGAAGAAGCAGAAACCTTAGCTGTGTCATCAGGATGTCCTGCGACAAGTGTTTCTGAGGGAATTGGG
CTCAGAGAATCTTTTCAACAGAAGAGCAGGCAGAAGGATCAATGTGAAAATCCCATACAAGTAAGAGTTA
AGAAAGAAGAGACCAATTTCAGTCACAGGACAGGAAAAGACTCTGAAGTATCAGGAAGTAATAGTCTTGA
CTTAAAACATGTTACATATTTGAGAGTTTCTGGAAGAAAGGAATCCCTTAAACATGGCTGTGGCAAACAC
TTCAGAATGAGTTCACACCACTATGACTACAAGAAATATGGGAAGGGGCTCAGACACATGATTGGGGGCT
TCAGCCTACATCAGAGAATTCATAGTGGACTGAAAGGGAACAAAAAGGACGTGTGTGGAAAAGACTTCAG
CCTTAGCTCTCATCACCAACGTGGGCAGAGTCTTCACACAGTGGGAGTGTCATTTAAGTGCAGTGACTGT
GGAAGGACTTTCAGTCATAGCTCCCATCTTGCGTATCATCAGAGACTTCACACTCAAGAGAAAGCATTTA
AATGTAGGGTGTGTGGGAAAGCCTTCCGGTGGAGTTCCAACTGTGCGCGGCATGAGAAAATTCACACTGG
AGTGAAGCCTTATAAATGCGATTTATGTGAGAAAGCTTTCCGACGCCTGTCAGCCTACCGTCTGCACCGA
GAAACCCATGCTAAGAAGAAATTTCTTGAATTGAATCAGTATAGGGCAGCTCTCACCTACAGCTCAGGGT
TTGATCATCATTTGGGAGACCAAAGTGGGGAGAAACTCTTTGACTGCAGCCAGTGCAGGAAATCCTTCCA
CTGTAAGTCATATGTTCTTGAACATCAAAGGATTCACACCCAGGAGAAGCCCTATAAATGTACCAAATGT
AGGAAAACCTTTAGATGGAGATCAAACTTTACTCGTCATATGAGGTTGCATGAGGAGGAAAAATTCTACA
AACAAGATGAATGTCGTGAAGGCTTCAGGCAATCTCCTGACTGCAGTCAGCCCCAGGGTGCTCCCGCTGT
GGAGAAAACATTTCTGTGTCAGCAGTGTGGGAAAACTTTTACTAGAAAGAAAACTCTCGTTGACCACCAG
AGAATTCACACAGGTGAGAAACCTTACCAGTGTAGCGATTGTGGGAAGGACTTTGCCTATAGGTCAGCCT
TTATTGTTCATAAGAAGAAGCATGCCATGAAAAGAAAACCTGAGGGCGGGCCATCTTTTAGTCAGGACAC
AGTGTTCCAGGTTCCTCAGAGCAGTCACTCCAAAGAGGAGCCCTACAAATGCAGCCAGTGTGGCAAGGCC
TTCCGCAATCACTCATTCCTCCTCATCCATCAGAGAGTTCACACTGGAGAGAAGCCATATAAGTGCAGGG
AGTGTGGGAAAGCCTTCAGATGGAGTTCCAATCTCTACCGACATCAGAGGATTCACTCTCTTCAAAAACA
GTATGATTGCCATGAAAGTGAAAAGACTCCAAATGTGGAGCCAAAAATCCTCACTGGTGAGAAACGTTTT
TGGTGTCAAGAATGTGGGAAAACCTTTACACGTAAAAGAACCCTTTTAGATCATAAGGGAATACACAGTG
GAGAGAAGCGCTATAAATGTAATCTATGTGGGAAATCTTATGATAGAAACTATCGCCTTGTTAACCATCA
GAGGATCCACTCTACAGAGAGACCTTTCAAATGTCAGTGGTGTGGGAAAGAGTTCATTGGGAGACATACC
CTTTCCAGTCACCAGAGGAAACACACCAGAGCAGCACAGGCTGAACGTAGCCCGCCTGCACGGTCTTCCT
CTCAGGACACAAAGTTGAGATTACAGAAGCTAAAACCAAGTGAAGAGATGCCCCTCGAAGACTGCAAAGA
AGCTTGCAGCCAGAGCTCCAGGCTCACTGGACTCCAGGACATAAGCATTGGGAAAAAGTGCCACAAATGC
AGCATATGTGGGAAAACTTTTAACAAGAGTTCACAACTCATTAGCCACAAGAGATTTCATACTCGAGAGA
GGCCCTTCAAATGCAGCAAGTGTGGAAAGACCTTCAGGTGGTCTTCGAACCTGGCTCGGCATATGAAAAA
CCATATTAGAGATTAG

Translation (1031 aa):
MPPGRWHAAYPAQAQSSRERGRLQTVKKEEEDESYTPVQAARPQTLNRPGQELFRQLFRQLRYHESSGPL
ETLSRLRELCRWWLRPDVLSKAQILELLVLEQFLSILPGELRVWVQLHNPESGEEAVALLEELQRDLDGT
SWRDPGPAQSPDVHWMGTGALRSAQIWSLASPLRSSSALGDHLEPPYEIEARDFLAGQSDTPAAQMPALF
PREGCPGDQVTPTRSLTAQLQETMTFKDVEVTFSQDEWGWLDSAQRNLYRDVMLENYRNMASLVGPFTKP
ALISWLEAREPWGLNMQAAQPKGNPVAAPTGDDLQSKTNKFILNQEPLEEAETLAVSSGCPATSVSEGIG
LRESFQQKSRQKDQCENPIQVRVKKEETNFSHRTGKDSEVSGSNSLDLKHVTYLRVSGRKESLKHGCGKH
FRMSSHHYDYKKYGKGLRHMIGGFSLHQRIHSGLKGNKKDVCGKDFSLSSHHQRGQSLHTVGVSFKCSDC
GRTFSHSSHLAYHQRLHTQEKAFKCRVCGKAFRWSSNCARHEKIHTGVKPYKCDLCEKAFRRLSAYRLHR
ETHAKKKFLELNQYRAALTYSSGFDHHLGDQSGEKLFDCSQCRKSFHCKSYVLEHQRIHTQEKPYKCTKC
RKTFRWRSNFTRHMRLHEEEKFYKQDECREGFRQSPDCSQPQGAPAVEKTFLCQQCGKTFTRKKTLVDHQ
RIHTGEKPYQCSDCGKDFAYRSAFIVHKKKHAMKRKPEGGPSFSQDTVFQVPQSSHSKEEPYKCSQCGKA
FRNHSFLLIHQRVHTGEKPYKCRECGKAFRWSSNLYRHQRIHSLQKQYDCHESEKTPNVEPKILTGEKRF
WCQECGKTFTRKRTLLDHKGIHSGEKRYKCNLCGKSYDRNYRLVNHQRIHSTERPFKCQWCGKEFIGRHT
LSSHQRKHTRAAQAERSPPARSSSQDTKLRLQKLKPSEEMPLEDCKEACSQSSRLTGLQDISIGKKCHKC
SICGKTFNKSSQLISHKRFHTRERPFKCSKCGKTFRWSSNLARHMKNHIRD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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