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Report for CCDS13436.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13436.1 Public Homo sapiens 20 KCNG1 24 110 108 CCDS HistoryNCBI Gene:3755Re-query CCDS DB by CCDS ID:13436.1See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13436.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371571.5 ENSP00000360626.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371571.5Link to Ensembl Protein Viewer:ENSP00000360626.4Re-query CCDS DB by Nucleotide ID:ENST00000371571Re-query CCDS DB by Protein ID:ENSP00000360626
Original member Current member NCBI NM_002237.4 NP_002228.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002237.4Link to Protein Sequence:NP_002228.2Re-query CCDS DB by Nucleotide ID:NM_002237Re-query CCDS DB by Protein ID:NP_002228Link to BLAST:NP_002228.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002228.2 513 Q9UIX4-1 513 100% 0 0

Chromosomal Locations for CCDS 13436.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 51004039 51004806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 51009565 51010338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1542 nt):
ATGACCCTCTTACCGGGAGACAATTCTGACTACGACTACAGCGCGCTGAGCTGCACCTCGGACGCCTCCT
TCCACCCGGCCTTCCTCCCGCAGCGCCAGGCCATCAAGGGCGCGTTCTACCGCCGGGCGCAGCGGCTGCG
GCCGCAGGATGAGCCCCGCCAGGGCTGTCAGCCCGAGGACCGCCGCCGTCGGATCATCATCAACGTAGGC
GGCATCAAGTACTCGCTGCCCTGGACCACGCTGGACGAGTTCCCGCTGACGCGCCTGGGCCAGCTCAAGG
CCTGCACCAACTTCGACGACATCCTCAACGTGTGCGATGACTACGACGTCACCTGCAACGAGTTCTTCTT
CGACCGCAACCCGGGGGCCTTCGGCACTATCCTGACCTTCCTGCGCGCGGGCAAGCTGCGGCTGCTGCGC
GAGATGTGCGCGCTGTCCTTCCAGGAGGAGCTGCTGTACTGGGGCATCGCGGAGGACCACCTGGACGGCT
GCTGCAAGCGCCGCTACCTGCAGAAGATTGAGGAGTTCGCGGAGATGGTGGAGCGGGAGGAAGAGGACGA
CGCGCTGGACAGCGAGGGCCGCGACAGCGAGGGCCCGGCCGAGGGCGAGGGCCGCCTGGGGCGCTGCATG
CGGCGACTGCGCGACATGGTGGAGAGGCCGCACTCGGGGCTGCCTGGCAAGGTGTTCGCCTGCCTGTCGG
TGCTCTTCGTGACCGTCACCGCCGTCAACCTCTCCGTCAGCACCTTGCCCAGCCTGAGGGAGGAGGAGGA
GCAGGGCCACTGTTCCCAGATGTGCCACAACGTCTTCATCGTGGAGTCGGTGTGCGTGGGCTGGTTCTCC
CTGGAGTTCCTCCTGCGGCTCATTCAGGCGCCCAGCAAGTTCGCCTTCCTGCGGAGCCCGCTGACGCTGA
TCGACCTGGTGGCCATCCTGCCCTACTACATCACGCTGCTGGTGGACGGCGCCGCCGCAGGCCGTCGCAA
GCCCGGCGCGGGCAACAGCTACCTGGACAAGGTGGGGCTGGTGCTGCGCGTGCTGCGGGCGCTGCGCATC
CTGTACGTGATGCGCCTGGCGCGCCACTCCCTGGGGCTGCAGACGCTGGGGCTCACGGCCCGCCGCTGCA
CCCGCGAGTTCGGGCTCCTGCTGCTCTTCCTCTGCGTGGCCATCGCCCTCTTCGCGCCCCTGCTCTACGT
CATCGAGAACGAGATGGCCGACAGCCCCGAGTTCACCAGCATCCCTGCCTGCTACTGGTGGGCTGTCATC
ACCATGACGACGGTGGGCTATGGCGACATGGTCCCCAGGAGCACCCCGGGCCAGGTAGTGGCCCTGAGCA
GCATCCTGAGCGGCATCCTGCTCATGGCCTTCCCAGTCACCTCCATCTTCCACACCTTCTCCCGCTCCTA
CCTGGAGCTCAAGCAGGAGCAAGAGAGGGTGATGTTCCGGAGGGCGCAGTTCCTCATCAAAACCAAGTCG
CAGCTGAGCGTGTCCCAGGACAGTGACATCTTGTTCGGAAGTGCCTCCTCGGACACCAGAGACAATAACT
GA

Translation (513 aa):
MTLLPGDNSDYDYSALSCTSDASFHPAFLPQRQAIKGAFYRRAQRLRPQDEPRQGCQPEDRRRRIIINVG
GIKYSLPWTTLDEFPLTRLGQLKACTNFDDILNVCDDYDVTCNEFFFDRNPGAFGTILTFLRAGKLRLLR
EMCALSFQEELLYWGIAEDHLDGCCKRRYLQKIEEFAEMVEREEEDDALDSEGRDSEGPAEGEGRLGRCM
RRLRDMVERPHSGLPGKVFACLSVLFVTVTAVNLSVSTLPSLREEEEQGHCSQMCHNVFIVESVCVGWFS
LEFLLRLIQAPSKFAFLRSPLTLIDLVAILPYYITLLVDGAAAGRRKPGAGNSYLDKVGLVLRVLRALRI
LYVMRLARHSLGLQTLGLTARRCTREFGLLLLFLCVAIALFAPLLYVIENEMADSPEFTSIPACYWWAVI
TMTTVGYGDMVPRSTPGQVVALSSILSGILLMAFPVTSIFHTFSRSYLELKQEQERVMFRRAQFLIKTKS
QLSVSQDSDILFGSASSDTRDNN


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 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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