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Report for CCDS20029.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20029.1 Public Mus musculus 6 Wee2 23 108 98 CCDS HistoryNCBI Gene:381759Re-query CCDS DB by CCDS ID:20029.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20029.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038907.8 ENSMUSP00000038754.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038907.8Link to Ensembl Protein Viewer:ENSMUSP00000038754.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000038907Re-query CCDS DB by Protein ID:ENSMUSP00000038754
Original member Current member NCBI NM_201370.2 NP_958758.2 Accepted alive Link to Nucleotide Sequence:NM_201370.2Link to Protein Sequence:NP_958758.2Re-query CCDS DB by Nucleotide ID:NM_201370Re-query CCDS DB by Protein ID:NP_958758Link to BLAST:NP_958758.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_958758.2 555 Q66JT0 555 100% 0 0

Chromosomal Locations for CCDS 20029.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 40443978 40444301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40449623 40449819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40452602 40452653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40455072 40455244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40456900 40457018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40461005 40461151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40461957 40462064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40462183 40462268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40463126 40463296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40464140 40464282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 40465816 40465963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1668 nt):
ATGGCCGACACAGAGACTGACCAGGGACTGAACAAGAAATTAAGCTTCTCCTTTTGTGAAGAAGACACTG
AGAGTGAAGGGCAGATGACTGCACAAGACATCGGAGGGGCCCAGAGCCAAAAGCCTGGGAGGGAAGAAAG
TGAGGAGTTGGAGGGTCCCGTGCCTCCTACCAGAGATGAACTTCATACTTCTCTGAGCAGAGACAAGGAA
AGTCCAGGTCCTGATCTTTGGAAATCAGTTTCAGGCCCTCCCAAATGCCCAGAGACACCAGTATTACACA
GCAAGAGCAAGCTGCCAGTCCCTACCAACTTCTCCACTCCCAAAAATTCGCTGGGTCAGCCAGAGATTTC
TCTGCTAGAGAAGCTCTCCTCCCGAAGCTCTAGACATATGAGGCTCACACCTGCTTCCCTTATGGATGAG
AAGACCTCTTTGTCTCTGGTCAATATCAACCCATTCACTCCGGAGACCTACAGAAAATTACTCCTTCAAT
CAAAGGGCAAGAGGAAGACCAGAGACTATCTTGAGGAAACTGGAGAAGAGGAAAGCAAATCAGTACAGTG
GCTGCCTGCTAAGAGAAGTATTCTACAAGAAACTAATATGGCTTCCCGCTATGAAAAAGAATTCTTCGAG
ATAGAAAAAATCGGGGTTGGAGAATTTGGGACAGTCTACAAGTGCATTAAGAGGCTGGATGGATGCATTT
ATGCAATAAAGCGCTCTGCAAAGTCCTTTTCAGGATTATCAAATGAATTGGATTTGCATGAAGTTTATGC
TCATGCAGTGCTTGGCCATCATCCCCATGTGGTACGCTACTACTCATCATGGATAGAAGATGATCATGTG
GTCATTCAAAATGAATACTGTAATGGTGGGAGCCTGCAAGCTGCTATATCTGAAAACACTGCGTCCAATA
ATCACTTCCAAGAGCCCAAACTCAAAGACATCCTTCTGCAGATTTCCTTGGGACTTAAGTACATCCACAA
TTCTGGCATGGTACACCTGGACATCAAACCCAGTAACATCTTCATTTGTCATAAGATGCAGTGTGACTCT
CCTGTAGGCCCAGAAGAGGCTGAAAGTGAAGCTGACTGGTTTCTCAATGCCAGTGTGATGTATAAAATTG
GTGACCTGGGCCACGCGACATCAATCAGCAAACCTAAAGTGGAAGAAGGAGATACTCGTTTCCTGGCTAA
TGAGATCTTGCAAGAGAATTACCAACACCTCCCCAAAGCAGACATATTTGCCTTAGGATTAACAATCGCA
GTGGCTGCAGGAGCAGAGTCTTTACCCATCAATGGTGACATGTGGCATCATATCCGCAAAGGGAACTTTC
CAGAGATTTCCCAAGAGCTCTCGGATGACTTTTATGGTCTACTCAAGAACATGATCCACCCAGCTCCAAA
GGAGAGACCATCTGCAGCAGCTCTGGCCAGAAGTCGAATTCTCTGGCCTTTCTTGGAGAAGACTGATGAA
CTCCAGAAACAACTGAATTTGGAGAAATCCAAGACAGCCACACTGAAAAGGGAACTGAAAAAAGCTCGGC
ATATCCAGACCCCTCAGAGAGAAGTCCACCATTGTTATTATCAGATCTGCAAAGGCTCAAGACACCTCCT
GGTGGGAGGAAGGAGGAAGGCGCCCTCAAGCTTCACCCGTGGGACATCCTCCGTGTAG

Translation (555 aa):
MADTETDQGLNKKLSFSFCEEDTESEGQMTAQDIGGAQSQKPGREESEELEGPVPPTRDELHTSLSRDKE
SPGPDLWKSVSGPPKCPETPVLHSKSKLPVPTNFSTPKNSLGQPEISLLEKLSSRSSRHMRLTPASLMDE
KTSLSLVNINPFTPETYRKLLLQSKGKRKTRDYLEETGEEESKSVQWLPAKRSILQETNMASRYEKEFFE
IEKIGVGEFGTVYKCIKRLDGCIYAIKRSAKSFSGLSNELDLHEVYAHAVLGHHPHVVRYYSSWIEDDHV
VIQNEYCNGGSLQAAISENTASNNHFQEPKLKDILLQISLGLKYIHNSGMVHLDIKPSNIFICHKMQCDS
PVGPEEAESEADWFLNASVMYKIGDLGHATSISKPKVEEGDTRFLANEILQENYQHLPKADIFALGLTIA
VAAGAESLPINGDMWHHIRKGNFPEISQELSDDFYGLLKNMIHPAPKERPSAAALARSRILWPFLEKTDE
LQKQLNLEKSKTATLKRELKKARHIQTPQREVHHCYYQICKGSRHLLVGGRRKAPSSFTRGTSSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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