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Report for CCDS90742.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
90742.1 |
Public |
Mus musculus |
X |
8030474K03Rik |
23 |
108 |
98 |
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Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98
Review status: Reviewed (by RefSeq and Havana)
Attributes |
Nonsense-mediated decay (NMD) candidate |
Sequence IDs included in CCDS 90742.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000163399.7 |
ENSMUSP00000130455.2 |
Accepted |
alive |
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NCBI |
NM_001359671.1 |
NP_001346600.1 |
Accepted |
alive |
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Chromosomal Locations for CCDS 90742.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1641 nt): ATGAGCTCTTTGGGTAAGGCGGCAGTCCCCACAGCCTGTGATGATGAGGACACCCTTCTTACCGGAGATG CGAACTCCCAGCATCAGGTGTCTGGTTCTGAAGCTGGCTTGAGCCAGGAGGGCAGGGAGCGGTTAGGGGA CCCTGTGATCAGCCCAGGAGTTGCAGAGGGTCCGAGCCCCCTCCAAGGGCCTCTGGAGATCAGAGAGGGT GAGGCCAGCCTCCCGGGCCCCGAGAGCAGTGACTTAGGGTCTGGGTCTAAGATGGAGGCAACAGAGGACA CAGGCAGCATGCTTAGGGATCCGGAAGGCGGGGCCACTTCTCCCGTAGACCAAGAAGAAGAAGTTGACAT GGATTTCTTGCCCCAGCTCAGTATTGAGGCCATGACTGTCATGCGAGAGCTGACCAACCTACAGCTCCGA AAAGTCTGCAGGTACCCGTCCCCACGAACTTGTGCGGCTGAACTGGCTGCCCTCTGGGGAAACGTAGATG AAGGCTCCAACAGAGGGGCACTGTCTCCGAGCTCTGTGAGAGGGAAACAGGGCCCCGAAGGTGCACTGTA CCCCAGAGGCCTGGGGCGAGGCAGAGCCTGGGGGACCCCAAGAAGACACACCATAGGTAGGATGGTGAGC AGTGAAGGTGTCCACTATCCCTCCTCAAACCCTGTGTCTTCTGATGAGTTCAGTGACACTCATGTGATGA AAGGAACCGCTGGCCTCAAAGAAGACCAGGCCAGGTCCAGTGGCCTCACTGAGCTGGATAACATAGCCAG ACACACAAATGTCCGTGGCAGAGGAAATTTTGTCCATATTCCCCCTTCTGTACTGTCCAGTGCTACCTGG GGAGTCAGCTCAGGCATGGAAAGGCAGGCTTCAGGAGAACAGGAAAGCTCTTTGGCTAAGAAAAAGCCAA ATATGGTCTGGGGCAAAGAAGGGAGCAGGCCCAGCCACCATGGAGTGACTGCAGCTGCTGCCACCGCCTC TGCTGCTGCCCCTGCCTCAGCTTCTACAGCTTCAGGTGCCCTGCCCAAGACCAGTCCCAAAAAGAAGCAA GCTCAAGAGAAGACCTCCTCCTCAGATGTCTCAAGAGGATACCAGGGGAAAAACTTGCCAACATGGGGAC AGAGACTCAAATCAGCATTTGAGGGGCCAACGACTCTACCCCCAATCTCAGGGGTTGCTCTGCTAGGGAA GGCAAGTAAATGCTCACTGCCTTCAGGGCCCAAAGAGTTCAAGTCCATCTGCACTGGGAAGAAATCCATA GCAAAGAAGACAAGGGAGCCACAGGCAGGGCCCAAAGAAGATAACTCACCGAGAGATCCTGGTCTGCAGG CCCAAGTTCCACCACACAGGGCAGAGCAGCCTTCCGTGTGCATGTATCGTGGAGAAATGAGCAGGGGAGA CTTCAACATCAGAGCCCCTCAAGTTCCAGCAAACCCGCAGTTCTTCTCCTTGAGCCAGAGATGTGCCAGA CCCAGAGCACCACCTGCACCTGCTGGTGAACAGAATCAACTTATGGATCCCATATTCCCTAATGAAGAAA GTCAGCAAGTAATACATGGGACACCAGGTTGTGCACAGTGTGAGATGTTACAGAAGGAAATAGATGAACT CAAGGAACAACTCGGGCTGGCACTGCTGTGA
Translation (546 aa): MSSLGKAAVPTACDDEDTLLTGDANSQHQVSGSEAGLSQEGRERLGDPVISPGVAEGPSPLQGPLEIREG EASLPGPESSDLGSGSKMEATEDTGSMLRDPEGGATSPVDQEEEVDMDFLPQLSIEAMTVMRELTNLQLR KVCRYPSPRTCAAELAALWGNVDEGSNRGALSPSSVRGKQGPEGALYPRGLGRGRAWGTPRRHTIGRMVS SEGVHYPSSNPVSSDEFSDTHVMKGTAGLKEDQARSSGLTELDNIARHTNVRGRGNFVHIPPSVLSSATW GVSSGMERQASGEQESSLAKKKPNMVWGKEGSRPSHHGVTAAAATASAAAPASASTASGALPKTSPKKKQ AQEKTSSSDVSRGYQGKNLPTWGQRLKSAFEGPTTLPPISGVALLGKASKCSLPSGPKEFKSICTGKKSI AKKTREPQAGPKEDNSPRDPGLQAQVPPHRAEQPSVCMYRGEMSRGDFNIRAPQVPANPQFFSLSQRCAR PRAPPAPAGEQNQLMDPIFPNEESQQVIHGTPGCAQCEMLQKEIDELKEQLGLALL
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