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Report for CCDS14240.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14240.1 Public Homo sapiens X LANCL3 24 110 108 CCDS HistoryNCBI Gene:347404Re-query CCDS DB by CCDS ID:14240.1Re-query CCDS DB by GeneID:347404See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14240.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378621.7 ENSP00000367885.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378621.7Link to Ensembl Protein Viewer:ENSP00000367885.3Re-query CCDS DB by Nucleotide ID:ENST00000378621Re-query CCDS DB by Protein ID:ENSP00000367885
Original member Current member EBI ENST00000614025.4 ENSP00000479231.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614025.4Link to Ensembl Protein Viewer:ENSP00000479231.1Re-query CCDS DB by Nucleotide ID:ENST00000614025Re-query CCDS DB by Protein ID:ENSP00000479231
Original member Current member NCBI NM_198511.3 NP_940913.1 Accepted alive Link to Nucleotide Sequence:NM_198511.3Link to Protein Sequence:NP_940913.1Re-query CCDS DB by Nucleotide ID:NM_198511Re-query CCDS DB by Protein ID:NP_940913Link to BLAST:NP_940913.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_940913.1 388 Q6ZV70-2 388 100% 0 0

Chromosomal Locations for CCDS 14240.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 37571871 37572443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 37655688 37655811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 37659462 37659659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 37667282 37667489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 37668368 37668431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1167 nt):
ATGGACACCAAGCGCTGCTTCGCCAATCGCTTCGATGACTACCAGGGCAGCCTGCTGGCGGGCCAGTGTG
AGGAGGCGGTGGCGCCCTTGGTCACCGCCACCATCGAGCGCATCCTCCAGGAGCTTCCCCCACTCGGGGG
CGGCGCGGAGGCCCGAGGGGCGACGGCGGGGGCTAGCGCCTGCCAGGGGGGGCTTTATGGCGGCGTGGCC
GGAGTGGCGTATATGCTCTACCACGTCTCGCAGAGCCCGCTTTTCGCCACGGCCCGGGAACGCTACCTGC
GCTCGGCTAAGCGCCTCATCGACGCGTGCGCCCGCGCTGAGGAGTGGGGCGAACCGGACGCCGACACCCG
CGCCGCCTTCCTGCTCGGGGGCGCGGGCGTGTACGCCGTGGCCACGCTCGTATACCACGCCCTGGGCCGG
TCCGACTACGTGCAGCCGCTGGGCAAGTTCCGGGCTCTGTGTGCCGTCTGCGCGCCGGTCTCCTTCCTGG
AGTGCGGCTCCGACGAGCTGTTCGTGGGCCGCGCGGGTTACCTGTGTGCCGCGCTGGTGCTCAAGCAGAA
ACTCGCCCAGGAGGTGCTGACTCCAGCACAGATCAAGTCAATTTGTCAGGCAATTCTGGACTCTGGGAAG
CAGTATGCCATAAAGAAGAGGAAACCATTCCCCCTGATGTATTCTTACTATGGAACCGAATACTTGGGGG
CAGCTCACGGCTTGTCGTCTATTCTTCAGATGCTTCTTTCTTACCATGAGCATCTCAAGCCCTCAGATCG
GGAATTGGTATGGCAGAGCGTGGACTTTCTCATGGAACAGGAACAAAACTGCAACTGGCCACCTGAGCTC
GGCGAGACCATCGAGAGAGAGAATGAGCTGGTGCACTGGTGCCATGGCGCTCCAGGAATTGCCTATCTGT
TTGCCAAAGCTTATCTGGTTTCCAAGAAACCGCAGTACCTGGACACATGTATTCGGTGTGGGGAACTCAC
ATGGCAGAAAGGCCTGCTAAAGAAGGGGCCTGGGATTTGCCATGGAGTAGCCGGCAGTGCCTATGTCTTC
CTGCTGCTGTACCGGCTCACGGGAAACTCTAAATACATCTACCGAGCTCAAAGTTCATTCCCTGTAAACT
TGATAAAGATGGAACATCTGCTGTATACCAGACAACATTGCTTTTAA

Translation (388 aa):
MDTKRCFANRFDDYQGSLLAGQCEEAVAPLVTATIERILQELPPLGGGAEARGATAGASACQGGLYGGVA
GVAYMLYHVSQSPLFATARERYLRSAKRLIDACARAEEWGEPDADTRAAFLLGGAGVYAVATLVYHALGR
SDYVQPLGKFRALCAVCAPVSFLECGSDELFVGRAGYLCAALVLKQKLAQEVLTPAQIKSICQAILDSGK
QYAIKKRKPFPLMYSYYGTEYLGAAHGLSSILQMLLSYHEHLKPSDRELVWQSVDFLMEQEQNCNWPPEL
GETIERENELVHWCHGAPGIAYLFAKAYLVSKKPQYLDTCIRCGELTWQKGLLKKGPGICHGVAGSAYVF
LLLYRLTGNSKYIYRAQSSFPVNLIKMEHLLYTRQHCF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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