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Report for CCDS14049.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14049.1 Public Homo sapiens 22 EFCAB6 24 110 108 CCDS HistoryNCBI Gene:64800Re-query CCDS DB by CCDS ID:14049.1Re-query CCDS DB by GeneID:64800See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 14049.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262726.12 ENSP00000262726.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262726.12Link to Ensembl Protein Viewer:ENSP00000262726.7Re-query CCDS DB by Nucleotide ID:ENST00000262726Re-query CCDS DB by Protein ID:ENSP00000262726
Original member Current member NCBI NM_022785.4 NP_073622.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022785.4Link to Protein Sequence:NP_073622.2Re-query CCDS DB by Nucleotide ID:NM_022785Re-query CCDS DB by Protein ID:NP_073622Link to BLAST:NP_073622.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_073622.2 1501 Q5THR3-1 1501 100% 0 0

Chromosomal Locations for CCDS 14049.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 43528853 43528975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43530815 43530964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43534688 43534872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43537377 43537545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43540127 43540357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43554869 43555096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43576297 43576488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43580464 43580659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43590074 43590229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43600069 43600263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43608482 43608600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43615826 43615922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43626447 43626679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43632105 43632238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43635102 43635216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43667104 43667272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43668872 43669045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43671973 43672133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43672246 43672305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43677996 43678163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43683747 43683855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43687471 43687581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43711475 43711623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43716848 43716972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43731699 43731811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43735857 43735993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43755766 43755832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43765305 43765393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43772892 43773103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43782180 43782318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4506 nt):
ATGTGCAAAATGGCGATTATACCAGACTGGCTTAGGTCGCATCCTCACACACGAAAATTTACACATTCAA
GACCCCATTCTTCACCGTGTAGAGTATATTCAAGGAATGGTTCCCCAAATAAGTTCAGATCTTCTTCAAC
CACAGCTGTTGCAAATCCAACACTGTCCTCCTTAGATGTTAAACGGATTTTATTTCAAAAAATTACCGAC
AGAGGGGATGAGTTGCAAAAAGCCTTTCAGCTGCTGGATACTGGTCAGAACTTGACTGTGTCAAAAAGTG
AACTGAGAAGAATCATCACAGACTTCCTGATGCCGCTCACACGAGAACAGTTTCAGGACGTGTTGGCTCA
GATCCCCCTTAGCACCTCTGGTACTGTACCGTACCTTGCCTTTCTGTCCAGGTTTGGTGGAATTGACCTA
TATATAAATGGTATAAAGAGGGGAGGTGGGAATGAAATGAATTGCTGCCGCACATTAAGAGAACTTGAAA
TCCAAGTGGGAGAAAAGGTTTTCAAAAACATTAAGACTGTTATGAAAGCCTTTGAGCTCATTGATGTTAA
CAAGACTGGACTGGTTCGACCGCAGGAGCTAAGAAGGGTTCTGGAGACCTTCTGTATGAAGTTAAGAGAC
GAGGAATACGAAAAGTTTTCGAAACACTACAACATCCACAAGGATACTGCAGTAGATTACAACGTGTTTT
TGAAGAATCTCAGCATAAATAACGACTTGAACCTTAGATATTGTATGGGAAATCAAGAGGTCTCGTTGGA
GAATCAACAAGCCAAAAATTCCAAAAAGGAACGTTTGCTAGGTTCTGCATCATCTGAAGATATCTGGAGA
AACTACTCCTTGGATGAAATTGAGAGGAACTTTTGTCTACAACTTTCGAAGTCTTATGAAAAGGTTGAAA
AGGCCCTCAGTGCAGGGGACCCCTGTAAAGGTGGCTACGTGTCTTTTAATTATCTAAAGATTGTCCTCGA
CACTTTTGTATACCAAATACCAAGAAGAATTTTTATCCAGTTAATGAAAAGATTTGGACTTAAAGCCACC
ACTAAAATCAATTGGAAGCAATTTCTAACATCATTTCATGAGCCTCAGGGGTTGCAAGTTAGCAGTAAAG
GTCCCCTGACAAAAAGAAATAGCATCAACTCTAGAAATGAATCTCACAAGGAAAACATCATCACAAAGTT
ATTTAGACACACTGAAGATCACTCTGCGTCACTGAAGAAAGCATTACTGATAATCAACACTAAACCCGAT
GGACCGATAACAAGAGAAGAATTTCGATATATTCTAAATTGCATGGCTGTAAAACTAAGCGATTCAGAAT
TCAAAGAACTAATGCAAATGCTTGACCCTGGGGACACTGGAGTGGTCAACACCAGCATGTTTATTGATCT
GATTGAAGAGAACTGTAGGATGAGAAAGACATCTCCCTGTACAGATGCTAAGACACCTTTCCTCCTGGCC
TGGGATTCAGTGGAAGAAATTGTTCATGATACAATTACTAGGAACCTACAAGCTTTTTATAACATGCTAC
GCTCATATGACCTTGGAGACACAGGGCGCATTGGCCGAAATAATTTCAAGAAAATCATGCACGTCTTCTG
TCCATTTTTAACGAATGCACATTTCATAAAACTCTGCAGTAAGATTCAGGACATTGGTTCAGGAAGAATC
CTTTACAAGAAACTTTTGGCATGCATAGGAATTGATGGCCCACCCACTGTCTCTCCAGTTCTTGTTCCAA
AGGATCAGCTGTTAAGTGAACATTTACAAAAAGATGAACAGCAGCAGCCAGATCTTTCTGAGAGAACCAA
GCTCACGGAGGATAAAACCACCCTGACCAAGAAGATGACCACAGAAGAAGTGATTGAAAAATTCAAAAAG
TGTATACAGCAGCAGGACCCGGCATTCAAAAAACGATTTCTTGACTTCAGCAAGGAGCCTAATGGAAAAA
TTAACGTGCATGACTTTAAGAAGGTACTGGAAGACACTGGGATGCCCATGGACGATGATCAGTATGCCCT
GCTGACCACTAAAATAGGCTTCGAGAAGGAAGGGATGAGCTATCTTGATTTTGCAGCAGGATTTGAAGAT
CCTCCAATGAGAGGGCCGGAAACCACTCCGCCGCAGCCTCCAACTCCTTCAAAAAGTTACGTGAACAGCC
ACTTTATCACCGCAGAAGAATGCCTGAAGCTTTTCCCTAGGAGGCTGAAGGAGTCATTCCGGGACCCCTA
CTCTGCCTTCTTTAAAACAGATGCTGACAGGGATGGCATAATCAACATGCATGACCTTCACAGACTGCTC
CTGCATCTACTGCTTAATCTCAAAGACGACGAGTTTGAGCGCTTCCTTGGCCTTCTTGGCTTGAGACTTA
GTGTCACTTTAAATTTTCGGGAATTTCAAAATTTGTGTGAGAAGAGACCATGGAGAACAGATGAAGCGCC
TCAAAGACTCATTAGACCAAAACAGAAGGTTGCGGATTCAGAACTAGCTTGTGAGCAGGCTCATCAGTAT
CTTGTTACCAAAGCAAAAAACAGATGGTCAGACTTGTCTAAGAATTTTCTAGAAACCGATAATGAGGGCA
ATGGCATTCTTCGACGCCGGGACATAAAGAACGCACTGTACGGTTTTGATATTCCCCTCACACCAAGAGA
GTTTGAAAAGCTTTGGGCAAGATACGACACCGAGGGAAAAGGGCACATTACTTACCAGGAATTTTTACAG
AAATTGGGTATTAACTATTCGCCTGCTGTCCATCGGCCCTGTGCAGAGGATTATTTCAACTTCATGGGTC
ATTTTACAAAGCCACAGCAGCTACAGGAAGAGATGAAGGAGCTGCAGCAGAGCACAGAGAAGGCTGTGGC
AGCCAGGGATAAGCTTATGGACCGCCATCAAGATATCAGCAAAGCATTCACCAAAACTGATCAATCCAAA
ACCAACTACATATCCATATGCAAGATGCAGGAAGTGCTGGAAGAATGTGGATGTTCTCTTACCGAAGGGG
AGCTGACCCATCTGCTAAACAGTTGGGGAGTCAGCCGGCATGATAATGCTATCAATTACCTCGACTTCCT
GAGAGCAGTGGAGAACAGCAAGTCAACAGGAGCTCAGCCCAAGGAAAAAGAAGAGAGCATGCCAATCAAT
TTTGCAACGCTGAATCCACAGGAGGCTGTGAGGAAGATCCAGGAAGTAGTTGAGTCCTCCCAGCTGGCTT
TGTCCACGGCATTTTCTGCATTGGATAAAGAGGATACAGGATTTGTAAAGGCTACAGAATTCGGACAAGT
TCTTAAGGATTTCTGTTACAAACTAACGGACAATCAGTATCATTATTTTTTGAGGAAACTAAGAATTCAT
CTAACCCCCTATATAAATTGGAAATATTTTCTCCAGAACTTTAGCTGTTTCCTTGAGGAGACAGCTGATG
AGTGGGCTGAGAAAATGCCCAAAGGCCCGCCGCCTACCTCTCCCAAGGCCACAGCCGACAGAGACATCCT
GGCTCGCCTCCACAAAGCAGTGACTTCCCATTACCATGCCATCACCCAGGAGTTTGAGAATTTTGACACC
ATGAAAACGAACACCATCTCCAGAGAGGAGTTTAGGGCCATTTGTAATCGCCGCGTCCAAATCCTGACGG
ACGAACAGTTTGACAGACTCTGGAACGAGATGCCAGTCAATGCCAAGGGGAGGCTGAAATACCCGGACTT
CCTGAGCAGGTTCAGTTCCGAGACAGCAGCCACACCAATGGCCACTGGTGACTCGGCCGTGGCCCAGAGA
GGGAGCAGTGTCCCTGACGTCTCGGAAGGCACCAGATCTGCCCTCTCATTGCCCACTCAGGAGCTGAGAC
CAGGGTCAAAGTCGCAGAGCCACCCCTGTACTCCAGCGAGCACCACCGTGATCCCGGGCACTCCACCCTT
GCAGAACTGTGATCCCATAGAGAGCAGGCTCCGGAAGAGAATCCAGGGCTGCTGGCGCCAGCTCCTGAAA
GAATGCAAGGAGAAGGACGTGGCCAGACAGGGGGACATCAACGCCTCCGATTTCCTGGCTCTTGTGGAGA
AATTCAACCTGGACATAAGCAAAGAGGAGTGTCAGCAGCTCATTATAAAATACGACTTAAAGAGCAACGG
GAAATTTGCATACTGTGACTTCATTCAGAGCTGTGTCCTCCTGCTAAAAGCAAAGGAAAGCTCACTGATG
CACAGGATGAAGATCCAGAATGCACACAAGATGAAAGAAGCCGGCGCGGAGACGCCATCTTTTTACTCTG
CTCTGCTGCGTATTCAGCCCAAAATTGTGCACTGCTGGAGGCCAATGCGGCGCACGTTCAAAAGCTATGA
TGAGGCTGGAACAGGGCTGCTAAGCGTCGCAGATTTCAGGACGGTCCTGAGACAGTACAGCATCAACCTC
TCTGAGGAAGAGTTCTTCCATATTCTGGAGTATTACGATAAGACGCTGTCTTCAAAAATCTCCTACAACG
ACTTCCTCCGGGCATTCCTCCAGTAG

Translation (1501 aa):
MCKMAIIPDWLRSHPHTRKFTHSRPHSSPCRVYSRNGSPNKFRSSSTTAVANPTLSSLDVKRILFQKITD
RGDELQKAFQLLDTGQNLTVSKSELRRIITDFLMPLTREQFQDVLAQIPLSTSGTVPYLAFLSRFGGIDL
YINGIKRGGGNEMNCCRTLRELEIQVGEKVFKNIKTVMKAFELIDVNKTGLVRPQELRRVLETFCMKLRD
EEYEKFSKHYNIHKDTAVDYNVFLKNLSINNDLNLRYCMGNQEVSLENQQAKNSKKERLLGSASSEDIWR
NYSLDEIERNFCLQLSKSYEKVEKALSAGDPCKGGYVSFNYLKIVLDTFVYQIPRRIFIQLMKRFGLKAT
TKINWKQFLTSFHEPQGLQVSSKGPLTKRNSINSRNESHKENIITKLFRHTEDHSASLKKALLIINTKPD
GPITREEFRYILNCMAVKLSDSEFKELMQMLDPGDTGVVNTSMFIDLIEENCRMRKTSPCTDAKTPFLLA
WDSVEEIVHDTITRNLQAFYNMLRSYDLGDTGRIGRNNFKKIMHVFCPFLTNAHFIKLCSKIQDIGSGRI
LYKKLLACIGIDGPPTVSPVLVPKDQLLSEHLQKDEQQQPDLSERTKLTEDKTTLTKKMTTEEVIEKFKK
CIQQQDPAFKKRFLDFSKEPNGKINVHDFKKVLEDTGMPMDDDQYALLTTKIGFEKEGMSYLDFAAGFED
PPMRGPETTPPQPPTPSKSYVNSHFITAEECLKLFPRRLKESFRDPYSAFFKTDADRDGIINMHDLHRLL
LHLLLNLKDDEFERFLGLLGLRLSVTLNFREFQNLCEKRPWRTDEAPQRLIRPKQKVADSELACEQAHQY
LVTKAKNRWSDLSKNFLETDNEGNGILRRRDIKNALYGFDIPLTPREFEKLWARYDTEGKGHITYQEFLQ
KLGINYSPAVHRPCAEDYFNFMGHFTKPQQLQEEMKELQQSTEKAVAARDKLMDRHQDISKAFTKTDQSK
TNYISICKMQEVLEECGCSLTEGELTHLLNSWGVSRHDNAINYLDFLRAVENSKSTGAQPKEKEESMPIN
FATLNPQEAVRKIQEVVESSQLALSTAFSALDKEDTGFVKATEFGQVLKDFCYKLTDNQYHYFLRKLRIH
LTPYINWKYFLQNFSCFLEETADEWAEKMPKGPPPTSPKATADRDILARLHKAVTSHYHAITQEFENFDT
MKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSETAATPMATGDSAVAQR
GSSVPDVSEGTRSALSLPTQELRPGSKSQSHPCTPASTTVIPGTPPLQNCDPIESRLRKRIQGCWRQLLK
ECKEKDVARQGDINASDFLALVEKFNLDISKEECQQLIIKYDLKSNGKFAYCDFIQSCVLLLKAKESSLM
HRMKIQNAHKMKEAGAETPSFYSALLRIQPKIVHCWRPMRRTFKSYDEAGTGLLSVADFRTVLRQYSINL
SEEEFFHILEYYDKTLSSKISYNDFLRAFLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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