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Report for CCDS11394.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11394.2 Public Homo sapiens 17 KRT35 24 110 108 CCDS HistoryNCBI Gene:3886Re-query CCDS DB by CCDS ID:11394.2See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 11394.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000246639.7 ENSP00000246639.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000246639.7Link to Ensembl Protein Viewer:ENSP00000246639.3Re-query CCDS DB by Nucleotide ID:ENST00000246639Re-query CCDS DB by Protein ID:ENSP00000246639
Original member Current member NCBI NM_002280.6 NP_002271.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002280.6Link to Protein Sequence:NP_002271.3Re-query CCDS DB by Nucleotide ID:NM_002280Re-query CCDS DB by Protein ID:NP_002271Link to BLAST:NP_002271.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002271.3 455 Q92764 455 100% 0 0

Chromosomal Locations for CCDS 11394.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 41477056 41477203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41477518 41477738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41478361 41478486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41478834 41478995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41479347 41479503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41479699 41479781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41480627 41481097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1368 nt):
ATGGCTTCCAAATGCCTCAAGGCCGGCTTCTCTTCTGGGTCTCTCAAGAGCCCAGGAGGGGCCAGTGGGG
GCTCCACTCGTGTGTCCGCAATGTACTCCAGCAGCTCTTGCAAGCTTCCAAGTCTCTCCCCTGTGGCCAG
AAGTTTCTCTGCCTGCTCAGTGGGTCTGGGCAGAAGCAGCTACAGGGCCACCAGCTGCCTCCCTGCTCTC
TGCCTCCCTGCTGGAGGCTTCGCTACCAGCTACAGTGGGGGTGGGGGCTGGTTTGGGGAGGGCATCCTCA
CTGGCAATGAGAAGGAGACCATGCAATCCCTGAACGACCGCCTGGCCGGCTACCTGGAGAAGGTGCGTCA
GCTGGAGCAGGAGAACGCCAGCCTGGAGAGCCGCATCCGTGAGTGGTGTGAGCAGCAGGTCCCCTACATG
TGCCCTGACTACCAGTCCTACTTCCGGACCATCGAGGAGCTCCAGAAGAAGACTCTATGCAGCAAGGCTG
AGAATGCCAGGCTGGTGGTGGAGATTGACAATGCCAAATTGGCTGCAGATGACTTCAGGACCAAGTATGA
GACGGAGGTGTCCCTGCGGCAGCTGGTGGAGTCAGACATCAACGGCCTGCGCAGGATCCTGGATGACCTG
ACCCTGTGCAAGTCTGACCTGGAGGCCCAGGTGGAGTCCCTGAAGGAGGAGCTGCTCTGCCTGAAGAAGA
ACCATGAGGAGGAAGTGAACTCACTGCGCTGCCAACTTGGTGACCGCCTCAATGTTGAGGTGGACGCTGC
CCCACCTGTTGACCTGAACCGAGTTCTGGAGGAGATGAGGTGCCAGTATGAAACCCTGGTGGAGAATAAC
CGCCGGGATGCTGAAGACTGGTTGGACACCCAGAGTGAGGAGCTGAACCAGCAGGTGGTGTCCAGCTCAG
AGCAGTTGCAGTCCTGCCAGGCAGAGATCATCGAGCTGAGACGCACGGTCAACGCCCTGGAGATTGAGCT
GCAGGCTCAGCACAGCATGAGAGATGCTTTGGAATCCACCCTGGCAGAGACGGAGGCCCGCTATAGCTCC
CAGCTGGCCCAGATGCAGTGCATGATCACCAACGTGGAGGCCCAGCTGGCCGAGATCCGGGCTGACCTGG
AGCGGCAGAACCAGGAGTACCAGGTGCTGCTGGACGTCCGGGCCCGGCTGGAGTGTGAGATCAACACGTA
CCGGGGCCTGCTGGAGAGTGAGGACAGCAAGCTCCCCTGTAACCCATGTGCACCTGACTACTCACCCTCC
AAGTCATGCCTTCCCTGTCTTCCTGCGGCCTCCTGCGGTCCTAGTGCAGCCCGCACAAACTGCAGCCCCC
GCCCCATTTGTGTGCCCTGCCCAGGGGGTCGGTTCTGA

Translation (455 aa):
MASKCLKAGFSSGSLKSPGGASGGSTRVSAMYSSSSCKLPSLSPVARSFSACSVGLGRSSYRATSCLPAL
CLPAGGFATSYSGGGGWFGEGILTGNEKETMQSLNDRLAGYLEKVRQLEQENASLESRIREWCEQQVPYM
CPDYQSYFRTIEELQKKTLCSKAENARLVVEIDNAKLAADDFRTKYETEVSLRQLVESDINGLRRILDDL
TLCKSDLEAQVESLKEELLCLKKNHEEEVNSLRCQLGDRLNVEVDAAPPVDLNRVLEEMRCQYETLVENN
RRDAEDWLDTQSEELNQQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHSMRDALESTLAETEARYSS
QLAQMQCMITNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINTYRGLLESEDSKLPCNPCAPDYSPS
KSCLPCLPAASCGPSAARTNCSPRPICVPCPGGRF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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