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Report for CCDS34478.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34478.1 Public Homo sapiens 6 KLHL31 24 110 108 CCDS HistoryNCBI Gene:401265Re-query CCDS DB by CCDS ID:34478.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34478.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370905.4 ENSP00000359942.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370905.4Link to Ensembl Protein Viewer:ENSP00000359942.3Re-query CCDS DB by Nucleotide ID:ENST00000370905Re-query CCDS DB by Protein ID:ENSP00000359942
Original member Current member EBI ENST00000407079.1 ENSP00000384644.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407079.1Link to Ensembl Protein Viewer:ENSP00000384644.1Re-query CCDS DB by Nucleotide ID:ENST00000407079Re-query CCDS DB by Protein ID:ENSP00000384644
Original member Current member NCBI NM_001003760.5 NP_001003760.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001003760.5Link to Protein Sequence:NP_001003760.2Re-query CCDS DB by Nucleotide ID:NM_001003760Re-query CCDS DB by Protein ID:NP_001003760Link to BLAST:NP_001003760.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003760.2 634 Q9H511 634 100% 0 0

Chromosomal Locations for CCDS 34478.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 53651598 53652330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 53654101 53655272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1905 nt):
ATGGCACCCAAAAAGAAGATTGTCAAAAAGAACAAAGGAGATATCAATGAGATGACTATAATCGTAGAAG
ATAGCCCCCTAAACAAACTGAATGCTTTGAATGGGCTCCTAGAGGGAGGCAATGGCCTTAGCTGCATTTC
TTCTGAACTAACAGATGCTTCTTATGGCCCCAACCTCTTGGAAGGTTTAAGTAAAATGCGGCAGGAGAAC
TTCCTATGTGACTTAGTCATTGGTACCAAAACCAAATCCTTTGATGTTCATAAGTCAGTCATGGCTTCAT
GCAGTGAGTATTTTTACAACATCCTAAAAAAAGACCCGTCAATTCAGAGGGTGGATCTCAATGATATCTC
ACCACTAGGCCTGGCCACTGTCATTGCATATGCCTACACTGGAAAGCTCACTCTCTCCTTGTATACAATA
GGAAGCATTATTTCTGCTGCTGTTTATCTTCAGATCCATACTCTTGTAAAGATGTGCAGTGATTTTCTGA
TACGGGAGATGAGTGTTGAGAATTGCATGTATGTTGTTAATATTGCTGAAACATACTCCCTAAAAAATGC
AAAAGCAGCAGCCCAGAAATTTATTCGGGATAACTTCCTTGAATTTGCAGAATCGGATCAGTTTATGAAA
CTTACATTTGAACAAATTAATGAACTTCTTATAGATGATGACTTACAGTTGCCTTCTGAGATAGTAGCAT
TCCAGATTGCAATGAAATGGTTAGAATTTGACCAAAAGAGAGTAAAATACGCTGCAGATCTTTTGAGCAA
TATTCGCTTTGGTACCATCTCTGCACAAGACCTGGTCAATTATGTTCAATCCGTACCAAGAATGATGCAA
GATGCTGATTGTCACAGACTTCTCGTAGATGCTATGAACTACCACTTGCTTCCATATCATCAAAACACAT
TGCAATCTAGGCGAACAAGAATCCGAGGTGGCTGCCGAGTCCTCGTCACTGTTGGGGGACGCCCAGGCCT
TACTGAGAAGTCCCTTAGCAGAGACATCTTGTATAGAGACCCTGAAAATGGATGGAGCAAGCTTACGGAA
ATGCCAGCCAAAAGTTTTAATCAGTGTGTGGCTGTGATGGATGGATTTCTTTATGTAGCCGGTGGTGAAG
ACCAGAATGATGCAAGAAATCAAGCCAAGCATGCAGTCAGCAATTTCTGCAGATACGATCCCCGCTTCAA
CACCTGGATACACCTGGCCAGCATGAACCAGAAGCGCACGCACTTCAGCCTGAGCGTGTTCAACGGGCTC
GTGTACGCCGCGGGCGGCCGCAACGCAGAAGGAAGCCTGGCCTCGCTGGAGTGCTACGTGCCCTCCACCA
ATCAGTGGCAGCCGAAGACGCCCCTGGAGGTGGCGCGCTGCTGCCACGCTAGCGCGGTCGCCGACGGCCG
CGTGCTGGTGACCGGAGGCTACATAGCCAACGCCTACTCGCGCTCTGTGTGCGCCTACGACCCGGCCAGC
GACTCGTGGCAGGAGCTGCCGAACCTCAGCACACCCCGGGGCTGGCACTGCGCGGTCACGCTGAGCGACA
GAGTGTACGTGATGGGCGGCAGCCAGCTGGGGCCGCGCGGGGAGCGCGTGGACGTGCTCACCGTGGAGTG
CTACAGCCCCGCGACCGGCCAGTGGAGCTACGCGGCGCCGCTGCAGGTGGGAGTGAGCACTGCGGGCGTC
TCGGCGCTGCATGGCCGCGCCTACCTGGTGGGGGGCTGGAACGAGGGCGAGAAGAAGTACAAGAAGTGCA
TCCAGTGCTTCAGCCCCGAGCTCAACGAGTGGACGGAGGACGACGAGCTACCCGAGGCCACTGTCGGCGT
GTCCTGCTGCACCCTCTCGATGCCCAACAACGTGACTCGGGAATCCCGGGCCAGTTCGGTATCTTCTGTG
CCAGTCAGTATCTGA

Translation (634 aa):
MAPKKKIVKKNKGDINEMTIIVEDSPLNKLNALNGLLEGGNGLSCISSELTDASYGPNLLEGLSKMRQEN
FLCDLVIGTKTKSFDVHKSVMASCSEYFYNILKKDPSIQRVDLNDISPLGLATVIAYAYTGKLTLSLYTI
GSIISAAVYLQIHTLVKMCSDFLIREMSVENCMYVVNIAETYSLKNAKAAAQKFIRDNFLEFAESDQFMK
LTFEQINELLIDDDLQLPSEIVAFQIAMKWLEFDQKRVKYAADLLSNIRFGTISAQDLVNYVQSVPRMMQ
DADCHRLLVDAMNYHLLPYHQNTLQSRRTRIRGGCRVLVTVGGRPGLTEKSLSRDILYRDPENGWSKLTE
MPAKSFNQCVAVMDGFLYVAGGEDQNDARNQAKHAVSNFCRYDPRFNTWIHLASMNQKRTHFSLSVFNGL
VYAAGGRNAEGSLASLECYVPSTNQWQPKTPLEVARCCHASAVADGRVLVTGGYIANAYSRSVCAYDPAS
DSWQELPNLSTPRGWHCAVTLSDRVYVMGGSQLGPRGERVDVLTVECYSPATGQWSYAAPLQVGVSTAGV
SALHGRAYLVGGWNEGEKKYKKCIQCFSPELNEWTEDDELPEATVGVSCCTLSMPNNVTRESRASSVSSV
PVSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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