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Report for CCDS35363.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35363.1 Public Homo sapiens X SLC25A53 24 110 108 CCDS HistoryNCBI Gene:401612Re-query CCDS DB by CCDS ID:35363.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35363.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000594199.3 ENSP00000468980.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000594199.3Link to Ensembl Protein Viewer:ENSP00000468980.1Re-query CCDS DB by Nucleotide ID:ENST00000594199Re-query CCDS DB by Protein ID:ENSP00000468980
Original member Current member NCBI NM_001012755.5 NP_001012773.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001012755.5Link to Protein Sequence:NP_001012773.2Re-query CCDS DB by Nucleotide ID:NM_001012755Re-query CCDS DB by Protein ID:NP_001012773Link to BLAST:NP_001012773.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012773.2 307 Q5H9E4 307 100% 0 0

Chromosomal Locations for CCDS 35363.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 104104334 104105257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (924 nt):
ATGGGGGAGCAGAACCACTCTCCCGGGAAGGAGCTTCAGCACAGGACGCGAGCAGAGGCTCCAGGAAAGA
AAAGCTGGCATTCCCAGGCCTATGCCCTTGGGGCCGTTTCCAACTTTATGTCTACTTTTCTGACCTTTCC
TATCTATAAGGTTGTGTTCCGGCAACAGATCCATGCCATGGCAGTGTCAGAGGCTGTGAGACAGCTTTGG
CATGAAGGTCCTCAATACTTCTACCGGGGAATCTACCCTCCTCTTCTCTCCAAGACGTTGCAAGGGACTC
TTCTGTTTGGGACTTATGATAGCCTGCTGTGCTTTCTCTCTCCTGTTGGGCCACACACCCTGGGACACCG
CTGGGCTGCCGGGCTCATGTCTGGCGTGGTGGAGGCCGTGGCACTCAGCCCCTTTGAAAGGGTGCAAAAT
GTGCTCCAGGATGGTCGCAAGCAAGCTCGCTTCCCCAGCACCTTCAGCATTCTCAAGGAATTCAATTCTT
ATGGGCTTTGGGGGCGGCTGTCACTGGGCTACTATCGTGGTTTCTGGCCTGTCCTGGCCAGGAACAGCCT
GGGGAGTGCTCTATATTTTTCTTTCAAGGACCCCATCCAGGATGGCCTGGCAGAGCAAGGCCTGCCCCAC
TGGGTTCCTGCCTTGGTGTCTGGTAGTGTCAATGGAACAATCACCTGCCTAGTTCTGTATCCTCTGATTG
TGCTGGTTGCTAATATGCAGTCCCATATTGGATGGCAGAACATGCCAAGCCTGTGGGCCTCTGCCCAGGA
TGTATGGAACACTCGGGGCCGAAAGCTGCTCCTGATCTACCGTGGAGGCTCCCTAGTCATCCTAAGGTCC
AGTGTGACATGGGGCCTCACTACGGCAATCCATGACTTCCTGCAGAGGAAGTCGCACTCCAGGAAAGAGC
TGAAGACTGACTAG

Translation (307 aa):
MGEQNHSPGKELQHRTRAEAPGKKSWHSQAYALGAVSNFMSTFLTFPIYKVVFRQQIHAMAVSEAVRQLW
HEGPQYFYRGIYPPLLSKTLQGTLLFGTYDSLLCFLSPVGPHTLGHRWAAGLMSGVVEAVALSPFERVQN
VLQDGRKQARFPSTFSILKEFNSYGLWGRLSLGYYRGFWPVLARNSLGSALYFSFKDPIQDGLAEQGLPH
WVPALVSGSVNGTITCLVLYPLIVLVANMQSHIGWQNMPSLWASAQDVWNTRGRKLLLIYRGGSLVILRS
SVTWGLTTAIHDFLQRKSHSRKELKTD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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