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Report for CCDS46351.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46351.1 Public Homo sapiens 2 TGOLN2 24 110 108 CCDS HistoryNCBI Gene:10618Re-query CCDS DB by CCDS ID:46351.1Re-query CCDS DB by GeneID:10618See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46351.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377386.8 ENSP00000366603.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377386.8Link to Ensembl Protein Viewer:ENSP00000366603.3Re-query CCDS DB by Nucleotide ID:ENST00000377386Re-query CCDS DB by Protein ID:ENSP00000366603
Original member Current member NCBI NM_006464.4 NP_006455.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006464.4Link to Protein Sequence:NP_006455.2Re-query CCDS DB by Nucleotide ID:NM_006464Re-query CCDS DB by Protein ID:NP_006455Link to BLAST:NP_006455.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006455.2 437 O43493-2 437 100% 0 0

Chromosomal Locations for CCDS 46351.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 85322736 85322741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85324915 85324998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85326508 85327685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85327917 85327962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1314 nt):
ATGCGGTTCGTGGTTGCCTTGGTCCTCCTGAACGTCGCAGCGGCGGGAGCCGTGCCGCTCTTGGCCACCG
AAAGCGTCAAGCAAGAAGAAGCTGGAGTACGGCCTTCTGCAGGAAACGTCTCCACCCACCCCAGCTTGAG
CCAACGGCCTGGAGGCTCTACCAAGTCGCATCCGGAGCCGCAGACTCCAAAAGACAGCCCTAGCAAGTCG
AGTGCGGAGGCGCAGACCCCAGAAGACACCCCCAACAAGTCGGGTGCGGAGGCAAAGACCCAAAAAGACA
GCTCCAACAAGTCGGGTGCGGAGGCAAAGACCCAAAAAGGCAGCACTAGCAAGTCGGGTTCGGAGGCGCA
GACCACAAAAGACAGCACTAGTAAGTCGCATCCGGAGCTGCAGACTCCAAAAGACAGCACTGGCAAATCG
GGTGCGGAGGCGCAGACCCCAGAAGACAGCCCCAACAGGTCGGGTGCGGAGGCAAAGACCCAAAAAGACA
GCCCTAGCAAGTCAGGTTCGGAGGCGCAGACCACAAAAGATGTCCCTAATAAGTCGGGTGCGGACGGCCA
GACCCCAAAAGACGGCTCCAGCAAGTCGGGTGCGGAGGATCAGACCCCAAAAGACGTCCCTAACAAGTCG
GGTGCGGAGAAGCAGACTCCAAAAGACGGCTCTAACAAGTCCGGTGCAGAGGAGCAGGGCCCAATAGACG
GGCCCAGCAAGTCGGGTGCGGAGGAGCAGACCTCAAAAGACAGCCCTAACAAGGTGGTTCCAGAGCAGCC
TTCCCGGAAAGACCATTCCAAGCCCATCTCCAACCCTTCTGATAACAAGGAGCTCCCCAAGGCTGACACA
AACCAGCTTGCTGACAAAGGGAAGCTTTCTCCTCATGCTTTCAAAACCGAATCTGGGGAGGAAACTGACC
TCATTTCTCCCCCGCAGGAGGAAGTTAAGTCTTCAGAGCCTACTGAGGATGTGGAGCCCAAAGAGGCTGA
AGATGATGATACAGGACCCGAGGAGGGCTCACCGCCCAAAGAAGAGAAAGAAAAGATGTCCGGTTCTGCC
TCCAGTGAGAACCGTGAAGGGACACTTTCGGATTCCACGGGTAGCGAGAAGGATGACCTTTATCCGAACG
GTTCTGGAAATGGCAGCGCGGAGAGCAGCCACTTCTTTGCATATCTGGTGACTGCAGCCATTCTTGTGGC
TGTCCTCTATATCGCTCATCACAACAAGCGGAAGATCATTGCTTTTGTCCTGGAAGGAAAAAGATCTAAA
GTCACCCGGCGGCCAAAGGCCAGTGACTACCAACGTTTGGACCAGAAGTCCTAA

Translation (437 aa):
MRFVVALVLLNVAAAGAVPLLATESVKQEEAGVRPSAGNVSTHPSLSQRPGGSTKSHPEPQTPKDSPSKS
SAEAQTPEDTPNKSGAEAKTQKDSSNKSGAEAKTQKGSTSKSGSEAQTTKDSTSKSHPELQTPKDSTGKS
GAEAQTPEDSPNRSGAEAKTQKDSPSKSGSEAQTTKDVPNKSGADGQTPKDGSSKSGAEDQTPKDVPNKS
GAEKQTPKDGSNKSGAEEQGPIDGPSKSGAEEQTSKDSPNKVVPEQPSRKDHSKPISNPSDNKELPKADT
NQLADKGKLSPHAFKTESGEETDLISPPQEEVKSSEPTEDVEPKEAEDDDTGPEEGSPPKEEKEKMSGSA
SSENREGTLSDSTGSEKDDLYPNGSGNGSAESSHFFAYLVTAAILVAVLYIAHHNKRKIIAFVLEGKRSK
VTRRPKASDYQRLDQKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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