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Report for CCDS11327.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11327.1 Public Homo sapiens 17 MLLT6 24 110 108 CCDS HistoryNCBI Gene:4302Re-query CCDS DB by CCDS ID:11327.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11327.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000621332.5 ENSP00000479910.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000621332.5Link to Ensembl Protein Viewer:ENSP00000479910.1Re-query CCDS DB by Nucleotide ID:ENST00000621332Re-query CCDS DB by Protein ID:ENSP00000479910
Original member Current member NCBI NM_005937.4 NP_005928.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005937.4Link to Protein Sequence:NP_005928.2Re-query CCDS DB by Nucleotide ID:NM_005937Re-query CCDS DB by Protein ID:NP_005928Link to BLAST:NP_005928.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005928.2 1093 P55198 1093 100% 0 0

Chromosomal Locations for CCDS 11327.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 38705633 38705741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38706950 38707029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38707486 38707540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38707763 38707872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38709173 38709276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38709482 38709575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38711847 38712014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38712691 38712789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38715612 38715828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38716367 38716981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38717432 38717613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38717845 38717953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38719517 38719583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38719750 38719895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38720372 38720569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38720659 38720747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38721878 38722227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38722678 38722768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38724620 38724976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38725557 38725598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3282 nt):
ATGAAGGAGATGGTAGGAGGCTGCTGCGTATGTTCGGACGAGAGGGGCTGGGCCGAGAACCCGCTGGTCT
ACTGCGATGGGCACGCGTGCAGCGTGGCCGTCCACCAAGCTTGCTATGGCATCGTTCAGGTGCCAACGGG
ACCCTGGTTCTGCCGGAAATGTGAATCTCAGGAGCGAGCAGCCAGGGTGAGGTGTGAGCTGTGCCCACAC
AAAGACGGGGCATTGAAGAGGACTGATAATGGAGGCTGGGCACACGTGGTGTGTGCCCTCTACATCCCCG
AGGTGCAATTTGCCAACGTGCTCACCATGGAGCCCATCGTGCTGCAGTACGTGCCTCATGATCGCTTCAA
CAAGACCTGTTACATCTGCGAGGAGCAGGGCCGGGAGAGCAAGGCGGCCTCGGGAGCCTGCATGACCTGT
AACCGCCATGGATGTCGACAAGCTTTCCACGTCACCTGTGCCCAAATGGCAGGCTTGCTGTGTGAGGAAG
AAGTGCTGGAGGTGGACAACGTCAAGTACTGCGGCTACTGCAAATACCACTTCAGCAAGATGAAGACATC
CCGGCACAGCAGCGGGGGAGGCGGAGGAGGCGCTGGAGGAGGAGGTGGCAGCATGGGGGGAGGTGGCAGT
GGTTTCATCTCTGGGAGGAGAAGCCGGTCAGCCTCACCATCCACGCAGCAGGAGAAGCACCCCACCCACC
ACGAGAGGGGCCAGAAGAAGAGTCGAAAGGACAAAGAACGCCTTAAGCAGAAGCACAAGAAGCGGCCTGA
GTCGCCCCCCAGCATCCTCACCCCGCCCGTGGTCCCCACTGCTGACAAGGTCTCCTCCTCGGCTTCCTCT
TCCTCCCACCACGAGGCCAGCACGCAGGAGACCTCTGAGAGCAGCAGGGAGTCAAAGGGGAAAAAGTCTT
CCAGCCATAGCCTGAGTCATAAAGGGAAGAAACTGAGCAGTGGGAAAGGTGTGAGCAGTTTTACCTCCGC
CTCCTCTTCTTCCTCCTCCTCTTCCTCCTCCTCTGGGGGGCCCTTCCAGCCTGCAGTCTCGTCCCTGCAG
AGCTCCCCTGACTTCTCTGCATTCCCCAAGCTGGAGCAGCCAGAGGAGGACAAGTACTCCAAGCCCACAG
CCCCCGCCCCTTCAGCCCCTCCTTCTCCCTCAGCTCCCGAGCCCCCCAAGGCTGACCTTTTTGAGCAGAA
GGTGGTCTTCTCTGGCTTTGGGCCCATCATGCGCTTCTCCACCACCACCTCCAGCTCAGGCCGGGCCCGG
GCGCCCTCCCCTGGGGACTATAAGTCTCCCCACGTCACGGGGTCTGGGGCCTCGGCAGGCACCCACAAAC
GGATGCCCGCACTGAGTGCCACCCCTGTGCCTGCTGATGAGACCCCTGAGACAGGCCTGAAGGAGAAGAA
GCACAAAGCCAGCAAGAGGAGCCGCCATGGGCCAGGCCGTCCCAAGGGCAGCCGGAACAAGGAGGGCACT
GGGGGCCCAGCTGCCCCATCCTTGCCCAGTGCCCAGCTGGCTGGCTTTACCGCCACTGCTGCCTCACCCT
TCTCTGGAGGTTCCCTGGTCAGCTCCGGCCTGGGAGGTCTGTCCTCCCGAACCTTTGGGCCTTCTGGGAG
CTTGCCCAGCTTGAGCCTGGAGTCCCCCTTACTAGGGGCAGGCATCTACACCAGTAATAAGGACCCCATC
TCCCACAGTGGCGGGATGCTGCGGGCTGTCTGCAGCACCCCTCTCTCCTCCAGCCTCCTGGGGCCCCCAG
GGACCTCGGCCCTGCCCCGCCTCAGCCGCTCCCCGTTCACCAGCACCCTCCCCTCCTCTTCTGCTTCTAT
CTCCACCACTCAGGTGTTTTCTCTGGCTGGCTCTACCTTTAGCCTCCCTTCTACCCACATCTTTGGAACC
CCCATGGGTGCCGTTAATCCCCTCCTCTCCCAAGCTGAGAGCAGCCACACAGAGCCAGACCTGGAGGACT
GCAGCTTCCGGTGTCGGGGGACCTCCCCTCAGGAGAGTCTGTCTTCCATGTCCCCCATCAGCAGCCTCCC
CGCACTCTTCGACCAGACAGCCTCTGCACCCTGTGGGGGCGGCCAGTTAGACCCGGCGGCCCCAGGGACG
ACTAACATGGAGCAGCTTCTGGAGAAGCAGGGCGACGGGGAGGCCGGCGTCAACATCGTGGAGATGCTGA
AGGCGCTGCACGCGCTGCAGAAGGAGAACCAGCGGCTGCAAGAGCAGATCCTGAGCCTGACGGCCAAAAA
GGAGCGGCTGCAGATTCTCAACGTGCAGCTCTCTGTGCCCTTCCCTGCCCTGCCTGCTGCCCTGCCTGCC
GCCAACGGCCCTGTCCCTGGGCCCTATGGCCTGCCTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCACCA
GCAAGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACAACTCGCTGTCCACTTCTTCTGAGGACCCACA
CTCAGGCTGCCCGAGCCGCAGCAGCTCGTCGCTGTCCTTCCACAGCACGCCCCCACCGCTGCCCCTCCTC
CAGCAGAGCCCTGCCACTCTGCCCCTGGCCCTGCCTGGGGCCCCTGCCCCACTCCCGCCCCAGCCGCAGA
ACGGGTTGGGCCGGGCACCCGGGGCAGCGGGGCTGGGGGCCATGCCCATGGCTGAGGGGCTGTTGGGGGG
GCTGGCAGGCAGTGGGGGCCTGCCCCTCAATGGGCTCCTTGGGGGGTTGAATGGGGCCGCTGCCCCCAAC
CCCGCAAGCTTGAGCCAGGCTGGCGGGGCCCCCACGCTGCAGCTGCCAGGCTGTCTCAACAGCCTTACAG
AGCAGCAGAGACATCTCCTTCAGCAGCAAGAGCAGCAGCTCCAGCAACTCCAGCAGCTCCTGGCCTCCCC
GCAGCTGACCCCGGAACACCAGACTGTTGTCTACCAGATGATCCAGCAGATCCAGCAGAAACGGGAGCTG
CAGCGCCTGCAGATGGCTGGGGGCTCCCAGCTGCCCATGGCCAGCCTGCTGGCAGGAAGCTCCACCCCGC
TGCTGTCTGCGGGTACCCCTGGCCTGCTGCCCACAGCGTCTGCTCCACCCCTGCTGCCCGCTGGAGCCCT
AGTGGCTCCCTCGCTTGGCAACAACACAAGTCTCATGGCCGCAGCAGCTGCAGCTGCAGCAGTAGCAGCA
GCAGGCGGACCTCCAGTCCTCACTGCCCAGACCAACCCCTTCCTCAGCCTGTCGGGAGCAGAGGGCAGTG
GCGGTGGCCCCAAAGGAGGGACCGCTGACAAAGGAGCCTCAGCCAACCAGGAAAAAGGCTAA

Translation (1093 aa):
MKEMVGGCCVCSDERGWAENPLVYCDGHACSVAVHQACYGIVQVPTGPWFCRKCESQERAARVRCELCPH
KDGALKRTDNGGWAHVVCALYIPEVQFANVLTMEPIVLQYVPHDRFNKTCYICEEQGRESKAASGACMTC
NRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYCKYHFSKMKTSRHSSGGGGGGAGGGGGSMGGGGS
GFISGRRSRSASPSTQQEKHPTHHERGQKKSRKDKERLKQKHKKRPESPPSILTPPVVPTADKVSSSASS
SSHHEASTQETSESSRESKGKKSSSHSLSHKGKKLSSGKGVSSFTSASSSSSSSSSSSGGPFQPAVSSLQ
SSPDFSAFPKLEQPEEDKYSKPTAPAPSAPPSPSAPEPPKADLFEQKVVFSGFGPIMRFSTTTSSSGRAR
APSPGDYKSPHVTGSGASAGTHKRMPALSATPVPADETPETGLKEKKHKASKRSRHGPGRPKGSRNKEGT
GGPAAPSLPSAQLAGFTATAASPFSGGSLVSSGLGGLSSRTFGPSGSLPSLSLESPLLGAGIYTSNKDPI
SHSGGMLRAVCSTPLSSSLLGPPGTSALPRLSRSPFTSTLPSSSASISTTQVFSLAGSTFSLPSTHIFGT
PMGAVNPLLSQAESSHTEPDLEDCSFRCRGTSPQESLSSMSPISSLPALFDQTASAPCGGGQLDPAAPGT
TNMEQLLEKQGDGEAGVNIVEMLKALHALQKENQRLQEQILSLTAKKERLQILNVQLSVPFPALPAALPA
ANGPVPGPYGLPPQAGSSDSLSTSKSPPGKSSLGLDNSLSTSSEDPHSGCPSRSSSSLSFHSTPPPLPLL
QQSPATLPLALPGAPAPLPPQPQNGLGRAPGAAGLGAMPMAEGLLGGLAGSGGLPLNGLLGGLNGAAAPN
PASLSQAGGAPTLQLPGCLNSLTEQQRHLLQQQEQQLQQLQQLLASPQLTPEHQTVVYQMIQQIQQKREL
QRLQMAGGSQLPMASLLAGSSTPLLSAGTPGLLPTASAPPLLPAGALVAPSLGNNTSLMAAAAAAAAVAA
AGGPPVLTAQTNPFLSLSGAEGSGGGPKGGTADKGASANQEKG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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