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Report for CCDS63200.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63200.1 Public Homo sapiens 2 STK25 24 110 108 CCDS HistoryNCBI Gene:10494Re-query CCDS DB by CCDS ID:63200.1Re-query CCDS DB by GeneID:10494See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63200.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000405883.7 ENSP00000384444.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405883.7Link to Ensembl Protein Viewer:ENSP00000384444.3Re-query CCDS DB by Nucleotide ID:ENST00000405883Re-query CCDS DB by Protein ID:ENSP00000384444
Original member Current member EBI ENST00000405585.5 ENSP00000385541.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405585.5Link to Ensembl Protein Viewer:ENSP00000385541.1Re-query CCDS DB by Nucleotide ID:ENST00000405585Re-query CCDS DB by Protein ID:ENSP00000385541
Original member Current member NCBI NM_001271979.2 NP_001258908.1 Accepted alive Link to Nucleotide Sequence:NM_001271979.2Link to Protein Sequence:NP_001258908.1Re-query CCDS DB by Nucleotide ID:NM_001271979Re-query CCDS DB by Protein ID:NP_001258908Link to BLAST:NP_001258908.1
Original member Current member NCBI NM_001271980.2 NP_001258909.1 Accepted alive Link to Nucleotide Sequence:NM_001271980.2Link to Protein Sequence:NP_001258909.1Re-query CCDS DB by Nucleotide ID:NM_001271980Re-query CCDS DB by Protein ID:NP_001258909Link to BLAST:NP_001258909.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258908.1 349 O00506-2 349 100% 0 0
NP_001258909.1 349 O00506-2 349 100% 0 0

Chromosomal Locations for CCDS 63200.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 241495662 241495701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241496398 241496534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241497616 241497687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241498235 241498349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241498639 241498784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241498989 241499174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241499257 241499414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241500173 241500281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241500740 241500796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241508006 241508035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1050 nt):
ATGGCTCACCTCCGGGGATTTGCCAACCAGAGCACCAAGCTATGGATCATCATGGAGTACCTGGGCGGCG
GCTCAGCACTGGACTTGCTTAAACCAGGTCCCCTGGAGGAGACATACATTGCCACGATCCTGCGGGAGAT
TCTGAAGGGCCTGGATTATCTGCACTCCGAACGCAAGATCCACCGAGACATCAAAGCTGCCAACGTGCTA
CTCTCGGAGCAGGGTGACGTGAAGCTGGCGGACTTTGGGGTAGCAGGGCAGCTCACAGACACGCAGATTA
AGAGGAACACATTCGTGGGCACCCCCTTCTGGATGGCACCTGAGGTCATCAAGCAGTCGGCCTACGACTT
CAAGGCTGACATCTGGTCCCTGGGGATCACAGCCATCGAGCTGGCCAAGGGGGAGCCTCCAAACTCTGAC
CTCCACCCCATGCGCGTCCTGTTCCTGATTCCCAAGAACAGCCCACCCACACTGGAGGGCCAGCACAGCA
AGCCCTTCAAGGAGTTCGTGGAGGCCTGCCTCAACAAAGACCCCCGATTCCGGCCCACGGCCAAGGAGCT
CCTGAAGCACAAGTTCATCACACGCTACACCAAGAAGACCTCCTTCCTCACGGAGCTCATCGACCGCTAT
AAGCGCTGGAAGTCAGAGGGGCATGGCGAGGAGTCCAGCTCTGAGGACTCTGACATTGATGGCGAGGCGG
AGGACGGGGAGCAGGGCCCCATCTGGACGTTCCCCCCTACCATCCGGCCGAGTCCACACAGCAAGCTTCA
CAAGGGGACGGCCCTGCACAGTTCACAGAAGCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGTCCCAGTGC
CTGTCCACGCTGGTCCGGCCCGTCTTCGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGCGGGAGCGTGG
GTGCGCTGGAGGAGCTGGAGAACGCCTTCAGCCTGGCCGAGGAGTCCTGCCCCGGCATCTCAGACAAGCT
GATGGTGCACCTGGTGGAGCGAGTGCAGAGGTTTTCACACAACAGAAACCACCTGACATCCACCCGCTGA

Translation (349 aa):
MAHLRGFANQSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVL
LSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSD
LHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDRY
KRWKSEGHGEESSSEDSDIDGEAEDGEQGPIWTFPPTIRPSPHSKLHKGTALHSSQKPAEPVKRQPRSQC
LSTLVRPVFGELKEKHKQSGGSVGALEELENAFSLAEESCPGISDKLMVHLVERVQRFSHNRNHLTSTR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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