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Report for CCDS45211.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45211.1 Public Homo sapiens 15 GOLGA8B 24 110 108 CCDS HistoryNCBI Gene:440270Re-query CCDS DB by CCDS ID:45211.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45211.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000342314.9 ENSP00000343064.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000342314.9Link to Ensembl Protein Viewer:ENSP00000343064.5Re-query CCDS DB by Nucleotide ID:ENST00000342314Re-query CCDS DB by Protein ID:ENSP00000343064
Original member Current member EBI ENST00000683415.1 ENSP00000507830.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000683415.1Link to Ensembl Protein Viewer:ENSP00000507830.1Re-query CCDS DB by Nucleotide ID:ENST00000683415Re-query CCDS DB by Protein ID:ENSP00000507830
Original member Current member NCBI NM_001023567.5 NP_001018861.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001023567.5Link to Protein Sequence:NP_001018861.3Re-query CCDS DB by Nucleotide ID:NM_001023567Re-query CCDS DB by Protein ID:NP_001018861Link to BLAST:NP_001018861.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001018861.3 603 A8MQT2-1 603 100% 0 0

Chromosomal Locations for CCDS 45211.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 34527632 34527834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34527922 34528077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34528189 34528289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34528372 34528472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34528607 34528750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34529018 34529274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34529662 34529749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34529967 34530074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34530182 34530268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34531269 34531378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34531475 34531559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34531648 34531695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34531961 34531999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34532846 34532962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34534054 34534173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34535865 34535912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1812 nt):
ATGGCAGAAGAAACTGGACAGAGTAAATTAGCTGCAGCCAAGAAAAAGTTCAAAGAATATTGGCAGAGAA
ACCGCCCTGGTGTTCCAGCAGCAGCGAAGAGGAACACGAAAGCAAATGGCAGTAGCCCTGAGACGGCCGC
TTCTGGTGGTTGCCACTCATCTGAGGCTTCCTCCTCCGCCTCCTCCTCTCTGCATGCGCGTCAGAGCCCG
TGCCAAGAACAAGCAGCAGTCCTGAACTCGAGGTCCATAAAAATCAGTCGACTGAATGACACCATCAAAT
CTTTGAAACAACAGAAGAAACAAGTGGAACATCAGCTGGAAGAAGAAAAGAAAGCAAACAATGAGAAACA
GAAAGCTGAAAGGGAGCTAGAGGGTCAAATCCAGAGATTGAACACAGAGAAAAAGAAACTAAATACGGAC
CTGTATCACATGAAACATTCTCTCAGATACTTTGAAGAAGAGTCCAAGGATCTGGCCGGCCGCCTGCAAC
GTTCATCGCAGCGTATAGGAGAGTTAGAGTGGTCTCTCTGTGCTGTCGCCGCCACACAGAAGAAGAAGCC
GGATGGGTTCTCGAGCCGCAGTAAAGCACTTCTCAAGCGGCAGTTAGAGCAGTCCATACGGGAGCAGATA
CTGCTGAAAGGACACGTGACACAGTTGAAGGAGTCGCTTAAAGAAGTCCAGCTGGAGAGAGATCAATATG
CTGAACAAATAAAAGGAGAGAGGGCCCAGTGGCAGCAGAGGATGAGGAAAATGTCGCAGGAGGTTTGCAC
ATTGAAGGAGGAGAAGAAGCATGATACGCATCGGGTAGAGGAGCTGGAGAGGAGCTTGTCCAGACTCAAA
AACCAGATGGCTGAGCCACTGCCCCCGGATGCCCCAGCAGTGTCCTCTGAGGTGGAGCTGCAAGACCTGA
GGAAGGAGCTGGAGAGAGTGGCAGGAGAGCTCCAGGCTCAGGTGGAAAACAATCAGTGCATCAGTCTCCT
GAACCGTGGGCAAAAGGAGAGGCTTCGCGAGCAGGAGGAGAGGCTTCAGGAGCAGCAGGAGAGGCTTCGG
GAACGGGAGAAGAGGCTTCAGCAGCTGGCCGAGCCACAGAGCGACTTGGAGGAGCTGAAGCACGAGAACA
AGAGCGCACTGCAGTTGGAGCAGCAAGTAAAGGAGCTGCAGGAGAAGCTGGGCCAGGTGATGGAGACGCT
CACCTCGGCCGAGAAGGAGCCAGAGGCAGCAGTCCCAGCCTCAGGGACTGGGGGCGAGTCTAGCGGCCTT
ATGGACCTCCTGGAGGAGAAGGCGGACCTGAGGGAGCATGTGGAGAAACTGGAACTTGGATTCATCCAGT
ACCGGAGAGAGAGATGCCATCAGAAAGTACATCGCCTTCTAACAGAGCCAGGGGACAGTGCCAAAGATGC
GTCACCGGGAGGAGGCCATCATCAGGCTGGCCCAGGACAAGGAGGAGAGGAAGGTGAAGCTGCTGGAGCT
GCAGGAGATGGTGTTGCGGCTTGTGGCAGCTACAGCGAGGGGCACGGCAAATTCCTGGCCGCTGCCCGGA
ACCCTGCTGCTGAACCCAGTCCAGGAGCCCCAGCCCCCCAGGAGCTCGGGGCTGCCGACAAGCATGGTGA
TCTTTGTGAGGCGAGCCTCACCAACAGCGTGGAGCCTGCACAAGGAGAAGCCAGGGAGGGTTCTTCCCAG
GACAACCCTACTGCACAGCCAGTCCTGCAGCTCCTTGGTGAGATGCAGGACCACCAGGAGCACCCAGGCT
TGGGCAGCAACTGCTGTGTGCCATGCTTTTGCTGGGCTTGGCTGCCGAGAAGAAGGAGATAA

Translation (603 aa):
MAEETGQSKLAAAKKKFKEYWQRNRPGVPAAAKRNTKANGSSPETAASGGCHSSEASSSASSSLHARQSP
CQEQAAVLNSRSIKISRLNDTIKSLKQQKKQVEHQLEEEKKANNEKQKAERELEGQIQRLNTEKKKLNTD
LYHMKHSLRYFEEESKDLAGRLQRSSQRIGELEWSLCAVAATQKKKPDGFSSRSKALLKRQLEQSIREQI
LLKGHVTQLKESLKEVQLERDQYAEQIKGERAQWQQRMRKMSQEVCTLKEEKKHDTHRVEELERSLSRLK
NQMAEPLPPDAPAVSSEVELQDLRKELERVAGELQAQVENNQCISLLNRGQKERLREQEERLQEQQERLR
EREKRLQQLAEPQSDLEELKHENKSALQLEQQVKELQEKLGQVMETLTSAEKEPEAAVPASGTGGESSGL
MDLLEEKADLREHVEKLELGFIQYRRERCHQKVHRLLTEPGDSAKDASPGGGHHQAGPGQGGEEGEAAGA
AGDGVAACGSYSEGHGKFLAAARNPAAEPSPGAPAPQELGAADKHGDLCEASLTNSVEPAQGEAREGSSQ
DNPTAQPVLQLLGEMQDHQEHPGLGSNCCVPCFCWAWLPRRRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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