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Report for CCDS31094.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31094.1 Public Homo sapiens 1 OR13G1 24 110 108 CCDS HistoryNCBI Gene:441933Re-query CCDS DB by CCDS ID:31094.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31094.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000642119.1 ENSP00000493110.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000642119.1Link to Ensembl Protein Viewer:ENSP00000493110.1Re-query CCDS DB by Nucleotide ID:ENST00000642119Re-query CCDS DB by Protein ID:ENSP00000493110
Original member Current member NCBI NM_001005487.2 NP_001005487.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005487.2Link to Protein Sequence:NP_001005487.1Re-query CCDS DB by Nucleotide ID:NM_001005487Re-query CCDS DB by Protein ID:NP_001005487Link to BLAST:NP_001005487.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005487.1 307 Q8NGZ3 307 100% 0 0

Chromosomal Locations for CCDS 31094.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 247672118 247673041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (924 nt):
ATGAATCACAGCGTTGTAACTGAGTTCATTATTCTGGGCCTCACCAAAAAGCCTGAACTCCAGGGAATTA
TCTTCCTCTTTTTTCTCATTGTCTATCTTGTGGCTTTTCTCGGCAACATGCTCATCATCATTGCCAAAAT
CTATAACAACACCTTGCATACGCCCATGTATGTTTTCCTTCTGACACTGGCTGTTGTGGACATCATCTGC
ACAACAAGCATCATACCGAAGATGCTGGGGACCATGCTAACATCAGAAAATACCATTTCATATGCAGGCT
GCATGTCCCAGCTCTTCTTGTTCACATGGTCTCTGGGAGCTGAGATGGTTCTCTTCACCACCATGGCCTA
TGACCGCTATGTGGCCATTTGTTTCCCTCTTCATTACAGTACTATTATGAACCACCATATGTGTGTAGCC
TTGCTCAGCATGGTCATGGCTATTGCAGTCACCAATTCCTGGGTGCACACAGCTCTTATCATGAGGTTGA
CTTTCTGTGGGCCAAACACCATTGACCACTTCTTCTGTGAGATACCCCCATTGCTGGCTTTGTCCTGTAG
CCCTGTAAGAATCAATGAGGTGATGGTGTATGTTGCTGATATTACCCTGGCCATAGGGGACTTTATTCTT
ACCTGCATCTCCTATGGTTTTATCATTGTTGCTATTCTCCGTATCCGCACAGTAGAAGGCAAGAGGAAGG
CCTTCTCAACATGCTCATCTCATCTCACAGTGGTGACCCTTTACTATTCTCCTGTAATCTACACCTATAT
CCGCCCTGCTTCCAGCTATACATTTGAAAGAGACAAGGTGGTAGCTGCACTCTATACTCTTGTGACTCCC
ACATTAAACCCGATGGTGTACAGCTTCCAGAATAGGGAGATGCAGGCAGGAATTAGGAAGGTGTTTGCAT
TTCTGAAACACTAG

Translation (307 aa):
MNHSVVTEFIILGLTKKPELQGIIFLFFLIVYLVAFLGNMLIIIAKIYNNTLHTPMYVFLLTLAVVDIIC
TTSIIPKMLGTMLTSENTISYAGCMSQLFLFTWSLGAEMVLFTTMAYDRYVAICFPLHYSTIMNHHMCVA
LLSMVMAIAVTNSWVHTALIMRLTFCGPNTIDHFFCEIPPLLALSCSPVRINEVMVYVADITLAIGDFIL
TCISYGFIIVAILRIRTVEGKRKAFSTCSSHLTVVTLYYSPVIYTYIRPASSYTFERDKVVAALYTLVTP
TLNPMVYSFQNREMQAGIRKVFAFLKH


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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