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Report for CCDS5325.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5325.1 Public Homo sapiens 7 MAFK 24 110 108 CCDS HistoryNCBI Gene:7975Re-query CCDS DB by CCDS ID:5325.1Re-query CCDS DB by GeneID:7975See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5325.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343242.9 ENSP00000344903.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343242.9Link to Ensembl Protein Viewer:ENSP00000344903.4Re-query CCDS DB by Nucleotide ID:ENST00000343242Re-query CCDS DB by Protein ID:ENSP00000344903
Original member Current member EBI ENST00000403150.5 ENSP00000386009.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000403150.5Link to Ensembl Protein Viewer:ENSP00000386009.1Re-query CCDS DB by Nucleotide ID:ENST00000403150Re-query CCDS DB by Protein ID:ENSP00000386009
Original member Current member NCBI NM_002360.4 NP_002351.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002360.4Link to Protein Sequence:NP_002351.1Re-query CCDS DB by Nucleotide ID:NM_002360Re-query CCDS DB by Protein ID:NP_002351Link to BLAST:NP_002351.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002351.1 156 O60675 156 100% 0 0

Chromosomal Locations for CCDS 5325.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 1539193 1539228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1539941 1540375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (471 nt):
ATGACGACTAATCCCAAACCGAATAAGGCATTAAAGGTCAAGAAGGAGGCGGGCGAGAACGCCCCGGTGC
TCAGCGATGATGAGCTGGTGTCCATGTCGGTGCGGGAGCTGAACCAGCACCTGCGGGGTCTCACCAAGGA
GGAGGTGACCCGCCTGAAGCAGCGTCGGCGCACACTCAAGAACCGCGGCTACGCGGCCAGCTGCCGCATC
AAGCGGGTGACGCAGAAGGAGGAGCTGGAGCGGCAGCGCGTGGAGCTGCAGCAGGAGGTGGAGAAGCTGG
CGCGTGAGAACAGCAGCATGCGGCTGGAGCTGGACGCCCTGCGCTCCAAGTACGAGGCGCTGCAGACCTT
CGCGCGCACCGTGGCCCGGGGACCTGTGGCGCCCTCCAAGGTGGCCACCACCAGCGTCATCACCATCGTC
AAGTCCACCGAGCTCTCCTCCACCTCCGTGCCCTTCTCGGCTGCATCCTAG

Translation (156 aa):
MTTNPKPNKALKVKKEAGENAPVLSDDELVSMSVRELNQHLRGLTKEEVTRLKQRRRTLKNRGYAASCRI
KRVTQKEELERQRVELQQEVEKLARENSSMRLELDALRSKYEALQTFARTVARGPVAPSKVATTSVITIV
KSTELSSTSVPFSAAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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