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Report for CCDS36829.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36829.1 Public Mus musculus 14 Rps24 23 108 98 CCDS HistoryNCBI Gene:20088Re-query CCDS DB by CCDS ID:36829.1Re-query CCDS DB by GeneID:20088See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36829.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000225023.1 ENSMUSP00000152944.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000225023.1Link to Ensembl Protein Viewer:ENSMUSP00000152944.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000225023Re-query CCDS DB by Protein ID:ENSMUSP00000152944
Original member NCBI NM_207634.2 NP_997517.1 Updated not alive Link to Nucleotide Sequence:NM_207634.2Link to Protein Sequence:NP_997517.1Re-query CCDS DB by Nucleotide ID:NM_207634Re-query CCDS DB by Protein ID:NP_997517
Current member NCBI NM_207634.3 NP_997517.1 Accepted alive Link to Nucleotide Sequence:NM_207634.3Link to Protein Sequence:NP_997517.1Re-query CCDS DB by Nucleotide ID:NM_207634Re-query CCDS DB by Protein ID:NP_997517Link to BLAST:NP_997517.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997517.1 133 P62849 133 100% 0 0

Chromosomal Locations for CCDS 36829.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24490756 24490758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24491750 24491815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24491907 24492116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24493383 24493493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24495775 24495786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (402 nt):
ATGAATGACACAGTAACCATCCGGACCAGGAAGTTCATGACCAACCGTCTGCTTCAGAGGAAACAGATGG
TCATTGATGTCCTTCATCCTGGGAAGGCAACAGTACCAAAGACAGAAATTCGGGAAAAGCTGGCCAAAAT
GTACAAAACCACACCAGATGTCATCTTTGTATTTGGATTCAGAACCCACTTCGGTGGTGGCAAGACCACT
GGCTTTGGCATGATCTATGATTCTTTAGATTATGCAAAGAAGAATGAGCCTAAACACAGACTGGCAAGAC
ATGGCCTTTATGAGAAGAAAAAGACCTCCCGAAAACAGCGAAAGGAACGCAAGAACAGAATGAAGAAGGT
CAGGGGCACGGCGAAGGCCAATGTTGGTGCTGGCAAAAAGCCAAAGGAGTAG

Translation (133 aa):
MNDTVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTT
GFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKANVGAGKKPKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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