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Report for CCDS9794.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9794.1 Public Homo sapiens 14 ERH 24 110 108 CCDS HistoryNCBI Gene:2079Re-query CCDS DB by CCDS ID:9794.1Re-query CCDS DB by GeneID:2079See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9794.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000557016.6 ENSP00000451080.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000557016.6Link to Ensembl Protein Viewer:ENSP00000451080.1Re-query CCDS DB by Nucleotide ID:ENST00000557016Re-query CCDS DB by Protein ID:ENSP00000451080
Original member Current member NCBI NM_004450.3 NP_004441.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004450.3Link to Protein Sequence:NP_004441.1Re-query CCDS DB by Nucleotide ID:NM_004450Re-query CCDS DB by Protein ID:NP_004441Link to BLAST:NP_004441.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004441.1 104 P84090 104 100% 0 0

Chromosomal Locations for CCDS 9794.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 69380538 69380640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69386963 69387083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69394825 69394912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69398231 69398233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (315 nt):
ATGTCTCACACCATTTTGCTGGTACAGCCTACCAAGAGGCCAGAAGGCAGAACTTATGCTGACTACGAAT
CTGTGAATGAATGCATGGAAGGTGTTTGTAAAATGTATGAAGAACATCTGAAAAGAATGAATCCCAACAG
TCCCTCTATCACATATGACATCAGTCAGTTGTTTGATTTCATCGATGATCTGGCAGACCTCAGCTGCCTG
GTTTACCGAGCTGATACCCAGACATACCAGCCTTATAACAAAGACTGGATTAAAGAGAAGATCTACGTGC
TCCTTCGTCGGCAGGCCCAACAGGCTGGGAAATAA

Translation (104 aa):
MSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFIDDLADLSCL
VYRADTQTYQPYNKDWIKEKIYVLLRRQAQQAGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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