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Report for CCDS32996.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32996.1 Public Homo sapiens 19 NPHS1 24 110 108 CCDS HistoryNCBI Gene:4868Re-query CCDS DB by CCDS ID:32996.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32996.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378910.10 ENSP00000368190.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000378910.10Link to Ensembl Protein Viewer:ENSP00000368190.4Re-query CCDS DB by Nucleotide ID:ENST00000378910Re-query CCDS DB by Protein ID:ENSP00000368190
Original member Current member NCBI NM_004646.4 NP_004637.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004646.4Link to Protein Sequence:NP_004637.1Re-query CCDS DB by Nucleotide ID:NM_004646Re-query CCDS DB by Protein ID:NP_004637Link to BLAST:NP_004637.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004637.1 1241 O60500-1 1241 100% 0 0

Chromosomal Locations for CCDS 32996.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 35826514 35826645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35830844 35830956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35831053 35831146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35831296 35831371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35831476 35831500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35831643 35831762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35835705 35835761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35839237 35839418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35839496 35839607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35841715 35841866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35842124 35842280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35842379 35842550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35843472 35843593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35844103 35844243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35844319 35844459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35845368 35845540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35845669 35845798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35846008 35846194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35848041 35848165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35848253 35848397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35848637 35848794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35848976 35849147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35849236 35849363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35849550 35849653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35850364 35850445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35850961 35851089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35851262 35851384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35851457 35851672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35851780 35851837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3726 nt):
ATGGCCCTGGGGACGACGCTCAGGGCTTCTCTCCTGCTCCTGGGGCTGCTGACTGAAGGCCTGGCGCAGT
TGGCGATTCCTGCCTCCGTTCCCCGGGGCTTCTGGGCCCTGCCTGAAAACCTGACGGTGGTGGAGGGGGC
CTCAGTGGAGCTGCGTTGTGGGGTCAGCACCCCTGGCAGTGCGGTGCAATGGGCCAAAGATGGGCTGCTC
CTGGGCCCCGACCCCAGGATCCCAGGCTTCCCGAGGTACCGCCTGGAAGGGGACCCTGCTAGAGGTGAAT
TCCACCTGCACATCGAGGCCTGTGACCTCAGCGATGACGCGGAGTATGAGTGCCAGGTCGGCCGCTCTGA
GATGGGGCCCGAGCTCGTGTCTCCCAGAGTGATCCTCTCCATCCTGGTTCCTCCCAAGCTGCTCCTGCTG
ACCCCAGAGGCAGGCACCATGGTCACCTGGGTAGCTGGGCAGGAGTACGTGGTCAACTGTGTGTCTGGGG
ACGCGAAGCCAGCACCTGACATCACCATTCTCCTGAGTGGACAGACAATATCTGACATCTCTGCAAACGT
GAACGAGGGCTCCCAGCAGAAACTCTTCACTGTGGAGGCCACAGCCAGGGTGACACCCCGGAGCTCAGAT
AATAGGCAGTTGCTGGTCTGTGAGGCGTCTAGCCCAGCACTGGAGGCCCCCATCAAGGCCTCATTCACCG
TGAATGTTCTGTTCCCTCCAGGACCCCCTGTCATCGAGTGGCCAGGCCTGGATGAGGGGCACGTGCGGGC
AGGACAGAGCTTGGAGCTGCCGTGCGTGGCCCGAGGGGGTAATCCCTTAGCCACACTGCAGTGGCTGAAG
AATGGCCAGCCGGTGTCCACAGCGTGGGGCACAGAGCACACCCAGGCGGTGGCCCGCAGTGTGCTGGTGA
TGACCGTGAGGCCAGAAGACCATGGAGCGCAGCTCAGCTGCGAGGCCCACAACAGCGTGTCTGCAGGGAC
CCAGGAGCACGGCATCACACTGCAGGTCACCTTTCCCCCTAGTGCCATTATTATCTTGGGATCTGCATCC
CAGACTGAGAACAAGAACGTGACACTCTCCTGTGTCAGCAAGTCCAGTCGCCCGCGGGTTCTGCTACGAT
GGTGGCTGGGCTGGCGGCAGCTGCTGCCCATGGAGGAGACAGTCATGGATGGACTGCATGGCGGTCACAT
CTCCATGTCCAACCTGACATTCCTGGCGCGGCGGGAGGACAACGGTCTGACCCTCACATGTGAGGCCTTC
AGTGAAGCCTTCACCAAGGAGACCTTCAAGAAGTCGCTCATCCTGAACGTAAAATATCCCGCCCAGAAAC
TGTGGATTGAGGGTCCCCCAGAGGGCCAGAAGCTCCGGGCTGGGACCCGGGTGAGGCTGGTGTGTTTGGC
TATCGGGGGCAACCCAGAGCCCTCCCTCATGTGGTACAAGGACTCGCGCACCGTGACCGAGTCGCGGCTG
CCGCAGGAGTCGCGGCGCGTGCATCTCGGCAGCGTGGAGAAATCTGGGAGCACCTTCTCCCGAGAGCTGG
TGCTGGTCACAGGGCCGTCGGACAACCAGGCCAAGTTCACGTGCAAGGCTGGACAGCTCAGCGCGTCCAC
GCAGCTGGCGGTGCAGTTTCCCCCAACTAACGTGACGATCCTGGCCAACGCATCCGCACTGCGCCCGGGA
GACGCCTTAAACTTGACATGCGTCAGCGTCAGCAGCAATCCGCCGGTCAACTTGTCCTGGGACAAGGAAG
GGGAGAGGCTGGAGGGCGTGGCCGCCCCACCCCGGAGAGCCCCATTCAAAGGCTCCGCCGCCGCCAGGAG
CGTCCTTCTGCAAGTGTCATCCCGCGATCATGGCCAGCGCGTGACCTGCCGCGCCCACAGCGCCGAGCTC
CGCGAAACCGTGAGCTCCTTCTATCGCCTCAACGTACTGTACCGTCCAGAGTTCCTGGGGGAGCAGGTGC
TGGTGGTGACCGCGGTGGAGCAGGGCGAGGCGTTGCTGCCCGTGTCCGTGTCCGCTAACCCCGCCCCCGA
GGCCTTCAACTGGACCTTCCGCGGCTATCGCCTCAGTCCAGCGGGCGGCCCCCGGCATCGCATCCTGTCC
AGCGGGGCTCTGCATCTGTGGAATGTGACCCGCGCGGACGACGGCCTCTATCAGCTGCACTGCCAGAACT
CTGAGGGCACCGCGGAAGCGCGGCTGCGGCTGGACGTGCACTATGCTCCCACCATCCGTGCCCTCCAGGA
CCCCACTGAGGTGAACGTCGGGGGTTCTGTGGACATAGTCTGCACTGTCGATGCCAATCCCATCCTCCCG
GGCATGTTCAACTGGGAGAGACTGGGAGAAGATGAGGAGGACCAGAGCCTGGATGACATGGAGAAGATAT
CCAGGGGACCAACGGGGCGCCTGCGGATTCACCATGCCAAACTGGCCCAGGCTGGCGCTTACCAGTGCAT
TGTGGACAATGGGGTGGCGCCTCCAGCACGACGGCTGCTCCGTCTTGTTGTCAGATTTGCCCCCCAGGTG
GAGCACCCCACTCCCCTAACTAAGGTGGCTGCAGCTGGAGACAGCACCAGTTCTGCCACCCTCCACTGCC
GTGCCCGAGGTGTCCCCAACATCGTTTTCACTTGGACAAAAAACGGGGTCCCTCTGGATCTCCAAGATCC
CAGGTACACGGAGCACACATACCACCAGGGTGGTGTCCACAGCAGCCTCCTGACCATTGCCAACGTGTCT
GCCGCCCAGGATTACGCCCTCTTCACATGTACAGCCACCAACGCCCTTGGCTCGGACCAAACCAACATTC
AACTTGTCAGCATCAGCCGCCCTGACCCTCCATCAGGATTAAAGGTTGTGAGTCTGACCCCACACTCCGT
GGGGCTGGAGTGGAAGCCTGGCTTTGATGGGGGCCTGCCACAGAGGTTCTGCATCAGGTATGAGGCCCTG
GGGACTCCAGGGTTCCACTATGTGGATGTCGTACCACCCCAGGCCACCACCTTCACGCTGACTGGTCTAC
AGCCTTCTACAAGATACAGGGTCTGGCTGCTGGCCAGTAATGCCTTGGGGGACAGTGGACTGGCTGACAA
AGGGACCCAGCTTCCCATCACTACCCCAGGTCTCCACCAGCCTTCTGGAGAACCTGAAGACCAGCTGCCC
ACAGAGCCACCTTCAGGACCCTCGGGGCTGCCCCTGCTGCCTGTGCTGTTCGCTCTTGGGGGGCTTCTGC
TCCTCTCCAATGCCTCCTGTGTCGGGGGGGTCCTCTGGCAGCGGAGACTCAGGCGTCTTGCTGAGGGCAT
CTCAGAGAAGACAGAGGCAGGGTCGGAAGAGGACCGAGTCAGGAACGAATATGAGGAGAGCCAGTGGACA
GGAGAGCGGGACACTCAGAGCTCCACGGTCAGCACAACAGAGGCAGAGCCGTATTACCGCTCCCTGAGGG
ACTTCAGCCCCCAGCTGCCCCCGACGCAGGAGGAGGTGTCTTATTCCCGAGGTTTCACAGGTGAAGATGA
GGATATGGCCTTCCCTGGGCACTTGTATGATGAGGTAGAAAGAACGTACCCCCCGTCTGGAGCCTGGGGA
CCCCTCTACGATGAAGTGCAGATGGGACCCTGGGACCTCCACTGGCCTGAAGACACATATCAGGATCCAA
GAGGAATCTATGACCAGGTGGCCGGAGACTTGGACACTCTGGAACCCGATTCTCTGCCCTTCGAGCTGAG
GGGACATCTGGTGTAA

Translation (1241 aa):
MALGTTLRASLLLLGLLTEGLAQLAIPASVPRGFWALPENLTVVEGASVELRCGVSTPGSAVQWAKDGLL
LGPDPRIPGFPRYRLEGDPARGEFHLHIEACDLSDDAEYECQVGRSEMGPELVSPRVILSILVPPKLLLL
TPEAGTMVTWVAGQEYVVNCVSGDAKPAPDITILLSGQTISDISANVNEGSQQKLFTVEATARVTPRSSD
NRQLLVCEASSPALEAPIKASFTVNVLFPPGPPVIEWPGLDEGHVRAGQSLELPCVARGGNPLATLQWLK
NGQPVSTAWGTEHTQAVARSVLVMTVRPEDHGAQLSCEAHNSVSAGTQEHGITLQVTFPPSAIIILGSAS
QTENKNVTLSCVSKSSRPRVLLRWWLGWRQLLPMEETVMDGLHGGHISMSNLTFLARREDNGLTLTCEAF
SEAFTKETFKKSLILNVKYPAQKLWIEGPPEGQKLRAGTRVRLVCLAIGGNPEPSLMWYKDSRTVTESRL
PQESRRVHLGSVEKSGSTFSRELVLVTGPSDNQAKFTCKAGQLSASTQLAVQFPPTNVTILANASALRPG
DALNLTCVSVSSNPPVNLSWDKEGERLEGVAAPPRRAPFKGSAAARSVLLQVSSRDHGQRVTCRAHSAEL
RETVSSFYRLNVLYRPEFLGEQVLVVTAVEQGEALLPVSVSANPAPEAFNWTFRGYRLSPAGGPRHRILS
SGALHLWNVTRADDGLYQLHCQNSEGTAEARLRLDVHYAPTIRALQDPTEVNVGGSVDIVCTVDANPILP
GMFNWERLGEDEEDQSLDDMEKISRGPTGRLRIHHAKLAQAGAYQCIVDNGVAPPARRLLRLVVRFAPQV
EHPTPLTKVAAAGDSTSSATLHCRARGVPNIVFTWTKNGVPLDLQDPRYTEHTYHQGGVHSSLLTIANVS
AAQDYALFTCTATNALGSDQTNIQLVSISRPDPPSGLKVVSLTPHSVGLEWKPGFDGGLPQRFCIRYEAL
GTPGFHYVDVVPPQATTFTLTGLQPSTRYRVWLLASNALGDSGLADKGTQLPITTPGLHQPSGEPEDQLP
TEPPSGPSGLPLLPVLFALGGLLLLSNASCVGGVLWQRRLRRLAEGISEKTEAGSEEDRVRNEYEESQWT
GERDTQSSTVSTTEAEPYYRSLRDFSPQLPPTQEEVSYSRGFTGEDEDMAFPGHLYDEVERTYPPSGAWG
PLYDEVQMGPWDLHWPEDTYQDPRGIYDQVAGDLDTLEPDSLPFELRGHLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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