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Report for CCDS10502.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10502.1 Public Homo sapiens 16 OR2C1 24 110 108 CCDS HistoryNCBI Gene:4993Re-query CCDS DB by CCDS ID:10502.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10502.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304936.4 ENSP00000307726.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304936.4Link to Ensembl Protein Viewer:ENSP00000307726.2Re-query CCDS DB by Nucleotide ID:ENST00000304936Re-query CCDS DB by Protein ID:ENSP00000307726
Original member Current member NCBI NM_012368.3 NP_036500.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012368.3Link to Protein Sequence:NP_036500.2Re-query CCDS DB by Nucleotide ID:NM_012368Re-query CCDS DB by Protein ID:NP_036500Link to BLAST:NP_036500.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036500.2 312 O95371 312 100% 0 0

Chromosomal Locations for CCDS 10502.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 3355941 3356879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGACGGGGTGAATGATAGCTCCTTGCAGGGCTTTGTTCTGATGGGCATATCAGACCATCCCCAGCTGG
AGATGATCTTTTTTATAGCCATCCTCTTCTCCTATTTGCTGACCCTACTTGGGAACTCAACCATCATCTT
GCTTTCCCGCCTGGAGGCCCGGCTCCATACACCCATGTACTTCTTCCTCAGCAACCTCTCCTCCTTGGAC
CTTGCTTTCGCTACTAGTTCAGTCCCCCAAATGCTGATCAATTTATGGGGACCAGGCAAGACCATCAGCT
ATGGTGGCTGCATAACCCAGCTCTATGTCTTCCTTTGGCTGGGGGCCACCGAGTGCATCCTGCTGGTGGT
GATGGCATTTGACCGCTACGTGGCAGTGTGCCGGCCCCTCCGCTACACCGCCATCATGAACCCCCAGCTC
TGCTGGCTGCTGGCTGTGATTGCCTGCCTGGGTGGCTTGGGCAACTCTGTGATCCAGTCAACATTCACTC
TGCAGCTCCCATTGTGTGGGCACCGGAGGGTGGAGGGATTCCTCTGCGAGGTGCCTGCCATGATCAAACT
GGCCTGTGGCGACACAAGTCTCAACCAGGCTGTGCTCAATGGTGTCTGCACCTTCTTCACTGCAGTCCCA
CTAAGCATCATCGTGATCTCCTACTGCCTCATTGCTCAGGCAGTGCTGAAAATCCGCTCTGCAGAGGGGA
GGCGAAAGGCGTTCAATACGTGCCTCTCCCATCTGCTGGTGGTGTTCCTCTTCTATGGCTCAGCCAGCTA
TGGGTATCTGCTTCCGGCCAAGAACAGCAAACAGGACCAGGGCAAGTTCATTTCCCTGTTCTACTCGTTG
GTCACACCCATGGTGAATCCCCTCATCTACACGCTGCGGAACATGGAAGTGAAGGGCGCACTGAGGAGGT
TGCTGGGGAAAGGAAGAGAAGTTGGCTGA

Translation (312 aa):
MDGVNDSSLQGFVLMGISDHPQLEMIFFIAILFSYLLTLLGNSTIILLSRLEARLHTPMYFFLSNLSSLD
LAFATSSVPQMLINLWGPGKTISYGGCITQLYVFLWLGATECILLVVMAFDRYVAVCRPLRYTAIMNPQL
CWLLAVIACLGGLGNSVIQSTFTLQLPLCGHRRVEGFLCEVPAMIKLACGDTSLNQAVLNGVCTFFTAVP
LSIIVISYCLIAQAVLKIRSAEGRRKAFNTCLSHLLVVFLFYGSASYGYLLPAKNSKQDQGKFISLFYSL
VTPMVNPLIYTLRNMEVKGALRRLLGKGREVG


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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