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Report for CCDS60880.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60880.1 Public Homo sapiens 11 ANAPC15 24 110 108 CCDS HistoryNCBI Gene:25906Re-query CCDS DB by CCDS ID:60880.1Re-query CCDS DB by GeneID:25906See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60880.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000543587.5 ENSP00000439403.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543587.5Link to Ensembl Protein Viewer:ENSP00000439403.1Re-query CCDS DB by Nucleotide ID:ENST00000543587Re-query CCDS DB by Protein ID:ENSP00000439403
Original member Current member EBI ENST00000545680.5 ENSP00000443645.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000545680.5Link to Ensembl Protein Viewer:ENSP00000443645.1Re-query CCDS DB by Nucleotide ID:ENST00000545680Re-query CCDS DB by Protein ID:ENSP00000443645
Original member Current member NCBI NM_001278485.2 NP_001265414.1 Accepted alive Link to Nucleotide Sequence:NM_001278485.2Link to Protein Sequence:NP_001265414.1Re-query CCDS DB by Nucleotide ID:NM_001278485Re-query CCDS DB by Protein ID:NP_001265414Link to BLAST:NP_001265414.1
Original member Current member NCBI NM_001278486.2 NP_001265415.1 Accepted alive Link to Nucleotide Sequence:NM_001278486.2Link to Protein Sequence:NP_001265415.1Re-query CCDS DB by Nucleotide ID:NM_001278486Re-query CCDS DB by Protein ID:NP_001265415Link to BLAST:NP_001265415.1
Original member Current member NCBI NM_001393437.1 NP_001380366.1 Accepted alive Link to Nucleotide Sequence:NM_001393437.1Link to Protein Sequence:NP_001380366.1Re-query CCDS DB by Nucleotide ID:NM_001393437Re-query CCDS DB by Protein ID:NP_001380366Link to BLAST:NP_001380366.1
Original member Current member NCBI NM_001393438.1 NP_001380367.1 Accepted alive Link to Nucleotide Sequence:NM_001393438.1Link to Protein Sequence:NP_001380367.1Re-query CCDS DB by Nucleotide ID:NM_001393438Re-query CCDS DB by Protein ID:NP_001380367Link to BLAST:NP_001380367.1
Original member Current member NCBI NM_001393439.1 NP_001380368.1 Accepted alive Link to Nucleotide Sequence:NM_001393439.1Link to Protein Sequence:NP_001380368.1Re-query CCDS DB by Nucleotide ID:NM_001393439Re-query CCDS DB by Protein ID:NP_001380368Link to BLAST:NP_001380368.1
Original member Current member NCBI NM_001393440.1 NP_001380369.1 Accepted alive Link to Nucleotide Sequence:NM_001393440.1Link to Protein Sequence:NP_001380369.1Re-query CCDS DB by Nucleotide ID:NM_001393440Re-query CCDS DB by Protein ID:NP_001380369Link to BLAST:NP_001380369.1
Original member Current member NCBI NM_001393441.1 NP_001380370.1 Accepted alive Link to Nucleotide Sequence:NM_001393441.1Link to Protein Sequence:NP_001380370.1Re-query CCDS DB by Nucleotide ID:NM_001393441Re-query CCDS DB by Protein ID:NP_001380370Link to BLAST:NP_001380370.1
Original member Current member NCBI NM_001393442.1 NP_001380371.1 Accepted alive Link to Nucleotide Sequence:NM_001393442.1Link to Protein Sequence:NP_001380371.1Re-query CCDS DB by Nucleotide ID:NM_001393442Re-query CCDS DB by Protein ID:NP_001380371Link to BLAST:NP_001380371.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265414.1 125 P60006-2 125 100% 0 0
NP_001265415.1 125 P60006-2 125 100% 0 0
NP_001380366.1 125 P60006-2 125 100% 0 0
NP_001380367.1 125 P60006-2 125 100% 0 0
NP_001380368.1 125 P60006-2 125 100% 0 0
NP_001380369.1 125 P60006-2 125 100% 0 0
NP_001380370.1 125 P60006-2 125 100% 0 0
NP_001380371.1 125 P60006-2 125 100% 0 0

Chromosomal Locations for CCDS 60880.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 72109881 72109940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72110088 72110225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72110544 72110603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72111157 72111276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (378 nt):
ATGTCCACTTTGTTCCCCTCACTCTTCCCTCGTGTGACTGAGACTCTGTGGTTTAATCTGGATCGACCCT
GTGTGGAAGAGACAGAGCTGCAGCAGCAGGAACAGCAGCATCAGGCCTGGCTCCAAAGCATCGCGGAGAA
AGACAACAACCTGGTTCCTATTGGCAAGCCAGCCTCAGAGCACTATGATGACGAGGAAGAAGAGGATGAT
GAAGATGATGAGGATAGTGAAGAGGACTCAGAGGATGATGAGGATATGCAGGACATGGACGAGATGAATG
ACTACAATGAGTCACCGGATGATGGAGAGGTCAATGAGCCTCCTCTCCAGGTGGACATGGAAGGCAACGA
ACAGGATCAGGACCAGTGGATGATCTAG

Translation (125 aa):
MSTLFPSLFPRVTETLWFNLDRPCVEETELQQQEQQHQAWLQSIAEKDNNLVPIGKPASEHYDDEEEEDD
EDDEDSEEDSEDDEDMQDMDEMNDYNESPDDGEVNEPPLQVDMEGNEQDQDQWMI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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